Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.35■□□□□ 0.53
CDH4P55283 AC138894.3-201ENST00000603787 634 ntBASIC18.35■□□□□ 0.53
CDH4P55283 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDH4P55283 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH4P55283 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH4P55283 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH4P55283 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH4P55283 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH4P55283 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH4P55283 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDH4P55283 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDH4P55283 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH4P55283 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.34■□□□□ 0.53
CDH4P55283 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 TSPY19P-201ENST00000418461 509 ntBASIC18.34■□□□□ 0.53
CDH4P55283 AC096633.1-201ENST00000422446 749 ntBASIC18.34■□□□□ 0.53
CDH4P55283 TSPY18P-201ENST00000441642 509 ntBASIC18.34■□□□□ 0.53
CDH4P55283 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH4P55283 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 KRT126P-201ENST00000549467 1181 ntBASIC18.34■□□□□ 0.53
CDH4P55283 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH4P55283 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH4P55283 AC116407.2-201ENST00000613639 860 ntBASIC18.34■□□□□ 0.53
CDH4P55283 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH4P55283 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDH4P55283 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CDH4P55283 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH4P55283 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH4P55283 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH4P55283 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.33■□□□□ 0.53
CDH4P55283 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CDH4P55283 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.33■□□□□ 0.53
CDH4P55283 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDH4P55283 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH4P55283 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH4P55283 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH4P55283 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
CDH4P55283 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH4P55283 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH4P55283 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH4P55283 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH4P55283 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CDH4P55283 AC096582.2-201ENST00000510860 516 ntBASIC18.33■□□□□ 0.52
CDH4P55283 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH4P55283 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.52
CDH4P55283 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH4P55283 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.33■□□□□ 0.52
CDH4P55283 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH4P55283 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH4P55283 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH4P55283 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH4P55283 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH4P55283 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH4P55283 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH4P55283 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH4P55283 BCL2-203ENST00000589955 5011 ntBASIC18.33■□□□□ 0.52
CDH4P55283 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH4P55283 KRT18P55-202ENST00000578578 1546 ntBASIC18.33■□□□□ 0.52
CDH4P55283 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH4P55283 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH4P55283 TP73-AS1-210ENST00000637775 1455 ntBASIC18.33■□□□□ 0.52
CDH4P55283 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH4P55283 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CDH4P55283 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH4P55283 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH4P55283 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH4P55283 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH4P55283 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.32■□□□□ 0.52
CDH4P55283 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDH4P55283 AL450487.1-201ENST00000426799 995 ntBASIC18.32■□□□□ 0.52
CDH4P55283 KRT16P4-201ENST00000453883 522 ntBASIC18.32■□□□□ 0.52
CDH4P55283 KRT18P31-201ENST00000506277 1292 ntBASIC18.32■□□□□ 0.52
CDH4P55283 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH4P55283 AC091304.2-201ENST00000564639 760 ntBASIC18.32■□□□□ 0.52
CDH4P55283 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.32■□□□□ 0.52
CDH4P55283 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH4P55283 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms