Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NCKAP1LP55160 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.66■□□□□ 0.74
NCKAP1LP55160 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCKAP1LP55160 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCKAP1LP55160 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCKAP1LP55160 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCKAP1LP55160 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCKAP1LP55160 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCKAP1LP55160 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCKAP1LP55160 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCKAP1LP55160 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 AC074051.2-201ENST00000565115 352 ntBASIC19.65■□□□□ 0.74
NCKAP1LP55160 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 AC097374.2-201ENST00000618617 1306 ntBASIC19.65■□□□□ 0.74
NCKAP1LP55160 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCKAP1LP55160 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCKAP1LP55160 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 NSUN5P1-202ENST00000421140 1535 ntBASIC19.65■□□□□ 0.74
NCKAP1LP55160 NSUN5P2-203ENST00000457352 1529 ntBASIC19.65■□□□□ 0.74
NCKAP1LP55160 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCKAP1LP55160 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCKAP1LP55160 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.65■□□□□ 0.74
NCKAP1LP55160 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
NCKAP1LP55160 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.64■□□□□ 0.74
NCKAP1LP55160 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
NCKAP1LP55160 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.64■□□□□ 0.74
NCKAP1LP55160 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NCKAP1LP55160 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NCKAP1LP55160 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NCKAP1LP55160 AC007613.1-201ENST00000572811 2597 ntBASIC19.64■□□□□ 0.73
NCKAP1LP55160 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCKAP1LP55160 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCKAP1LP55160 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCKAP1LP55160 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.64■□□□□ 0.73
NCKAP1LP55160 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.64■□□□□ 0.73
NCKAP1LP55160 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NCKAP1LP55160 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.64■□□□□ 0.73
NCKAP1LP55160 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCKAP1LP55160 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCKAP1LP55160 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.64■□□□□ 0.73
NCKAP1LP55160 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NCKAP1LP55160 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NCKAP1LP55160 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCKAP1LP55160 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCKAP1LP55160 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCKAP1LP55160 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCKAP1LP55160 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
NCKAP1LP55160 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 AC104819.1-201ENST00000504587 486 ntBASIC19.63■□□□□ 0.73
NCKAP1LP55160 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.63■□□□□ 0.73
NCKAP1LP55160 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCKAP1LP55160 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCKAP1LP55160 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NCKAP1LP55160 AC009949.1-201ENST00000623048 1830 ntBASIC19.62■□□□□ 0.73
NCKAP1LP55160 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCKAP1LP55160 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCKAP1LP55160 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCKAP1LP55160 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NCKAP1LP55160 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCKAP1LP55160 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms