Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NUP98P52948 HMGN1P19-201ENST00000436976 333 ntBASIC22.24■■□□□ 1.15
NUP98P52948 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.24■■□□□ 1.15
NUP98P52948 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.24■■□□□ 1.15
NUP98P52948 AC018845.2-201ENST00000568326 409 ntBASIC22.24■■□□□ 1.15
NUP98P52948 CYB561-217ENST00000582997 877 ntTSL 5 BASIC22.24■■□□□ 1.15
NUP98P52948 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.24■■□□□ 1.15
NUP98P52948 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC22.24■■□□□ 1.15
NUP98P52948 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.24■■□□□ 1.15
NUP98P52948 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.24■■□□□ 1.15
NUP98P52948 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NUP98P52948 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.24■■□□□ 1.15
NUP98P52948 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
NUP98P52948 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.23■■□□□ 1.15
NUP98P52948 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
NUP98P52948 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
NUP98P52948 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.23■■□□□ 1.15
NUP98P52948 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NUP98P52948 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NUP98P52948 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC22.23■■□□□ 1.15
NUP98P52948 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
NUP98P52948 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
NUP98P52948 KRT18P2-201ENST00000447938 1258 ntBASIC22.23■■□□□ 1.15
NUP98P52948 DNAJB3-202ENST00000449667 1266 ntBASIC22.23■■□□□ 1.15
NUP98P52948 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NUP98P52948 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.23■■□□□ 1.15
NUP98P52948 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
NUP98P52948 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.23■■□□□ 1.15
NUP98P52948 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.23■■□□□ 1.15
NUP98P52948 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.23■■□□□ 1.15
NUP98P52948 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NUP98P52948 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC22.23■■□□□ 1.15
NUP98P52948 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
NUP98P52948 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NUP98P52948 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.23■■□□□ 1.15
NUP98P52948 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.23■■□□□ 1.15
NUP98P52948 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUP98P52948 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.22■■□□□ 1.15
NUP98P52948 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.22■■□□□ 1.15
NUP98P52948 AC092183.1-201ENST00000469884 875 ntBASIC22.22■■□□□ 1.15
NUP98P52948 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
NUP98P52948 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUP98P52948 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.22■■□□□ 1.15
NUP98P52948 AC064836.3-201ENST00000607928 673 ntBASIC22.22■■□□□ 1.15
NUP98P52948 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.22■■□□□ 1.15
NUP98P52948 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.22■■□□□ 1.15
NUP98P52948 AL049757.1-201ENST00000616842 1596 ntBASIC22.22■■□□□ 1.15
NUP98P52948 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.22■■□□□ 1.15
NUP98P52948 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
NUP98P52948 AC093503.3-201ENST00000624917 2352 ntBASIC22.22■■□□□ 1.15
NUP98P52948 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NUP98P52948 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUP98P52948 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
NUP98P52948 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
NUP98P52948 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
NUP98P52948 CRYGEP-201ENST00000412192 528 ntBASIC22.22■■□□□ 1.15
NUP98P52948 AL020989.1-201ENST00000422979 469 ntBASIC22.22■■□□□ 1.15
NUP98P52948 PMS2P2-201ENST00000425039 1128 ntBASIC22.22■■□□□ 1.15
NUP98P52948 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NUP98P52948 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.22■■□□□ 1.15
NUP98P52948 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.22■■□□□ 1.15
NUP98P52948 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.22■■□□□ 1.15
NUP98P52948 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUP98P52948 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUP98P52948 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC22.21■■□□□ 1.15
NUP98P52948 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUP98P52948 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.21■■□□□ 1.15
NUP98P52948 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC22.21■■□□□ 1.15
NUP98P52948 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.21■■□□□ 1.15
NUP98P52948 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.21■■□□□ 1.15
NUP98P52948 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUP98P52948 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.21■■□□□ 1.15
NUP98P52948 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NUP98P52948 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.21■■□□□ 1.15
NUP98P52948 AL691403.2-201ENST00000618460 490 ntBASIC22.21■■□□□ 1.15
NUP98P52948 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
NUP98P52948 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUP98P52948 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUP98P52948 AC135776.1-201ENST00000319817 2481 ntBASIC22.21■■□□□ 1.15
NUP98P52948 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.21■■□□□ 1.15
NUP98P52948 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
NUP98P52948 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NUP98P52948 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.2■■□□□ 1.14
NUP98P52948 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NUP98P52948 DNAJB3-201ENST00000446806 729 ntBASIC22.2■■□□□ 1.14
NUP98P52948 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.2■■□□□ 1.14
NUP98P52948 AL589182.2-201ENST00000619332 1049 ntBASIC22.2■■□□□ 1.14
NUP98P52948 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUP98P52948 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUP98P52948 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.2■■□□□ 1.14
NUP98P52948 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC22.2■■□□□ 1.14
NUP98P52948 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.2■■□□□ 1.14
NUP98P52948 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUP98P52948 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
NUP98P52948 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.2■■□□□ 1.14
NUP98P52948 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.2■■□□□ 1.14
NUP98P52948 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NUP98P52948 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.2■■□□□ 1.14
NUP98P52948 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUP98P52948 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms