Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 AC106820.2-201ENST00000563775 3264 ntBASIC19.68■□□□□ 0.74
CDR1P51861 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDR1P51861 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDR1P51861 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.68■□□□□ 0.74
CDR1P51861 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.68■□□□□ 0.74
CDR1P51861 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDR1P51861 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDR1P51861 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDR1P51861 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.68■□□□□ 0.74
CDR1P51861 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDR1P51861 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDR1P51861 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.68■□□□□ 0.74
CDR1P51861 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDR1P51861 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.67■□□□□ 0.74
CDR1P51861 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.67■□□□□ 0.74
CDR1P51861 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.67■□□□□ 0.74
CDR1P51861 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CDR1P51861 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.67■□□□□ 0.74
CDR1P51861 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDR1P51861 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR1P51861 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.67■□□□□ 0.74
CDR1P51861 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR1P51861 AL645929.1-201ENST00000420084 975 ntBASIC19.67■□□□□ 0.74
CDR1P51861 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.67■□□□□ 0.74
CDR1P51861 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR1P51861 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDR1P51861 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR1P51861 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR1P51861 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR1P51861 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CDR1P51861 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.67■□□□□ 0.74
CDR1P51861 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CDR1P51861 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR1P51861 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDR1P51861 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDR1P51861 AC034236.2-201ENST00000606662 1610 ntBASIC19.66■□□□□ 0.74
CDR1P51861 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.66■□□□□ 0.74
CDR1P51861 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDR1P51861 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.66■□□□□ 0.74
CDR1P51861 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.66■□□□□ 0.74
CDR1P51861 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDR1P51861 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 KRT18P56-201ENST00000507275 550 ntBASIC19.66■□□□□ 0.74
CDR1P51861 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.66■□□□□ 0.74
CDR1P51861 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.66■□□□□ 0.74
CDR1P51861 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.66■□□□□ 0.74
CDR1P51861 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 AC012313.10-201ENST00000623509 926 ntBASIC19.66■□□□□ 0.74
CDR1P51861 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDR1P51861 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDR1P51861 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDR1P51861 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.66■□□□□ 0.74
CDR1P51861 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDR1P51861 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDR1P51861 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDR1P51861 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.65■□□□□ 0.74
CDR1P51861 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDR1P51861 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.65■□□□□ 0.74
CDR1P51861 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.65■□□□□ 0.74
CDR1P51861 AC104390.1-201ENST00000555663 520 ntBASIC19.65■□□□□ 0.74
CDR1P51861 RNF126P1-202ENST00000569893 925 ntBASIC19.65■□□□□ 0.74
CDR1P51861 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.65■□□□□ 0.74
CDR1P51861 AL136038.4-201ENST00000603606 1261 ntBASIC19.65■□□□□ 0.74
CDR1P51861 AC092119.3-201ENST00000612618 583 ntBASIC19.65■□□□□ 0.74
CDR1P51861 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.65■□□□□ 0.74
CDR1P51861 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CDR1P51861 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.65■□□□□ 0.74
CDR1P51861 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.65■□□□□ 0.74
CDR1P51861 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDR1P51861 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDR1P51861 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.64■□□□□ 0.74
CDR1P51861 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDR1P51861 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDR1P51861 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDR1P51861 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms