Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP4P49662 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.6■□□□□ 0.73
CASP4P49662 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.6■□□□□ 0.73
CASP4P49662 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.6■□□□□ 0.73
CASP4P49662 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.6■□□□□ 0.73
CASP4P49662 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.6■□□□□ 0.73
CASP4P49662 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.6■□□□□ 0.73
CASP4P49662 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.6■□□□□ 0.73
CASP4P49662 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.6■□□□□ 0.73
CASP4P49662 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CASP4P49662 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP4P49662 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP4P49662 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP4P49662 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP4P49662 TSPY12P-201ENST00000421279 868 ntBASIC19.6■□□□□ 0.73
CASP4P49662 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.6■□□□□ 0.73
CASP4P49662 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP4P49662 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.6■□□□□ 0.73
CASP4P49662 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.6■□□□□ 0.73
CASP4P49662 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP4P49662 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.6■□□□□ 0.73
CASP4P49662 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.6■□□□□ 0.73
CASP4P49662 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP4P49662 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CASP4P49662 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP4P49662 GNAS-203ENST00000306120 1878 ntBASIC19.6■□□□□ 0.73
CASP4P49662 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP4P49662 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP4P49662 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP4P49662 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CASP4P49662 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CASP4P49662 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.59■□□□□ 0.73
CASP4P49662 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASP4P49662 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CASP4P49662 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CASP4P49662 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASP4P49662 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.59■□□□□ 0.73
CASP4P49662 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CASP4P49662 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.59■□□□□ 0.73
CASP4P49662 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CASP4P49662 FZD10-202ENST00000539839 3282 ntBASIC19.59■□□□□ 0.73
CASP4P49662 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.59■□□□□ 0.73
CASP4P49662 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.59■□□□□ 0.73
CASP4P49662 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
CASP4P49662 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.59■□□□□ 0.73
CASP4P49662 AC009154.2-201ENST00000621177 724 ntBASIC19.59■□□□□ 0.73
CASP4P49662 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CASP4P49662 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CASP4P49662 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.59■□□□□ 0.73
CASP4P49662 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CASP4P49662 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CASP4P49662 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
CASP4P49662 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CASP4P49662 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CASP4P49662 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CASP4P49662 AC022898.2-201ENST00000616822 1312 ntBASIC19.58■□□□□ 0.73
CASP4P49662 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CASP4P49662 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CASP4P49662 ARMC10P1-201ENST00000313754 855 ntBASIC19.58■□□□□ 0.72
CASP4P49662 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CASP4P49662 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CASP4P49662 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.58■□□□□ 0.72
CASP4P49662 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CASP4P49662 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.58■□□□□ 0.72
CASP4P49662 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CASP4P49662 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.58■□□□□ 0.72
CASP4P49662 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.58■□□□□ 0.72
CASP4P49662 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CASP4P49662 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CASP4P49662 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CASP4P49662 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CASP4P49662 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CASP4P49662 LINC00896-202ENST00000609602 2128 ntBASIC19.58■□□□□ 0.72
CASP4P49662 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
CASP4P49662 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CASP4P49662 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.58■□□□□ 0.72
CASP4P49662 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.58■□□□□ 0.72
CASP4P49662 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CASP4P49662 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CASP4P49662 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CASP4P49662 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CASP4P49662 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.57■□□□□ 0.72
CASP4P49662 LETM1P2-201ENST00000597330 2178 ntBASIC19.57■□□□□ 0.72
CASP4P49662 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.57■□□□□ 0.72
CASP4P49662 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CASP4P49662 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASP4P49662 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CASP4P49662 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CASP4P49662 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASP4P49662 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.57■□□□□ 0.72
CASP4P49662 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CASP4P49662 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.57■□□□□ 0.72
CASP4P49662 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.57■□□□□ 0.72
CASP4P49662 PCED1CP-201ENST00000419887 785 ntBASIC19.57■□□□□ 0.72
CASP4P49662 AC068472.1-201ENST00000474589 881 ntBASIC19.57■□□□□ 0.72
CASP4P49662 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.57■□□□□ 0.72
CASP4P49662 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASP4P49662 AC011498.5-201ENST00000592027 486 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms