Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CX3CR1P49238 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CR1P49238 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CX3CR1P49238 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CR1P49238 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CR1P49238 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CX3CR1P49238 AC139713.2-201ENST00000641328 2723 ntBASIC15.82■□□□□ 0.12
CX3CR1P49238 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CR1P49238 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CR1P49238 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CX3CR1P49238 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CX3CR1P49238 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 AC012317.2-201ENST00000623305 2251 ntBASIC15.82■□□□□ 0.12
CX3CR1P49238 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CX3CR1P49238 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CR1P49238 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CX3CR1P49238 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.81■□□□□ 0.12
CX3CR1P49238 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
CX3CR1P49238 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.81■□□□□ 0.12
CX3CR1P49238 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.81■□□□□ 0.12
CX3CR1P49238 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CX3CR1P49238 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.81■□□□□ 0.12
CX3CR1P49238 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CX3CR1P49238 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.81■□□□□ 0.12
CX3CR1P49238 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.81■□□□□ 0.12
CX3CR1P49238 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CX3CR1P49238 KRT18P55-202ENST00000578578 1546 ntBASIC15.81■□□□□ 0.12
CX3CR1P49238 AC008687.5-201ENST00000593746 558 ntBASIC15.81■□□□□ 0.12
CX3CR1P49238 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
CX3CR1P49238 LINC00896-202ENST00000609602 2128 ntBASIC15.81■□□□□ 0.12
CX3CR1P49238 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CX3CR1P49238 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 AC066615.1-201ENST00000640911 628 ntBASIC15.81■□□□□ 0.12
CX3CR1P49238 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.81■□□□□ 0.12
CX3CR1P49238 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CR1P49238 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
CX3CR1P49238 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CX3CR1P49238 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CX3CR1P49238 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.8■□□□□ 0.12
CX3CR1P49238 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CX3CR1P49238 SIRPAP1-201ENST00000448467 1770 ntBASIC15.8■□□□□ 0.12
CX3CR1P49238 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CX3CR1P49238 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.8■□□□□ 0.12
CX3CR1P49238 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
CX3CR1P49238 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.8■□□□□ 0.12
CX3CR1P49238 AC087499.1-201ENST00000418141 1075 ntBASIC15.8■□□□□ 0.12
CX3CR1P49238 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.8■□□□□ 0.12
CX3CR1P49238 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.8■□□□□ 0.12
CX3CR1P49238 AC145285.6-201ENST00000604632 637 ntBASIC15.8■□□□□ 0.12
CX3CR1P49238 AL157888.1-201ENST00000631930 593 ntBASIC15.8■□□□□ 0.12
CX3CR1P49238 AC141257.4-201ENST00000634557 245 ntBASIC15.8■□□□□ 0.12
CX3CR1P49238 AC136944.6-201ENST00000634818 245 ntBASIC15.8■□□□□ 0.12
CX3CR1P49238 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms