Protein–RNA interactions for Protein: P48681

NES, Nestin, humanhuman

Predictions only

Length 1,621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NESP48681 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
NESP48681 AC025048.6-201ENST00000634326 1161 ntBASIC30.7■■■□□ 2.51
NESP48681 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
NESP48681 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
NESP48681 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
NESP48681 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
NESP48681 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC30.7■■■□□ 2.5
NESP48681 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
NESP48681 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
NESP48681 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
NESP48681 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
NESP48681 TREML5P-201ENST00000421694 576 ntBASIC30.69■■■□□ 2.5
NESP48681 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC30.69■■■□□ 2.5
NESP48681 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC30.69■■■□□ 2.5
NESP48681 CXCL1P1-201ENST00000502804 216 ntBASIC30.69■■■□□ 2.5
NESP48681 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
NESP48681 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC30.69■■■□□ 2.5
NESP48681 SPDYE22P-201ENST00000582158 798 ntBASIC30.69■■■□□ 2.5
NESP48681 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NESP48681 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
NESP48681 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC30.69■■■□□ 2.5
NESP48681 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
NESP48681 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
NESP48681 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
NESP48681 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NESP48681 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
NESP48681 AP001059.3-201ENST00000619053 235 ntBASIC30.69■■■□□ 2.5
NESP48681 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC30.69■■■□□ 2.5
NESP48681 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NESP48681 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
NESP48681 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NESP48681 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
NESP48681 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
NESP48681 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
NESP48681 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NESP48681 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
NESP48681 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
NESP48681 HNRNPA1P40-201ENST00000426371 1278 ntBASIC30.68■■■□□ 2.5
NESP48681 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NESP48681 TUBB3P1-201ENST00000405796 1332 ntBASIC30.68■■■□□ 2.5
NESP48681 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
NESP48681 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NESP48681 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NESP48681 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
NESP48681 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC30.67■■■□□ 2.5
NESP48681 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NESP48681 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
NESP48681 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NESP48681 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
NESP48681 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
NESP48681 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC30.67■■■□□ 2.5
NESP48681 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC30.67■■■□□ 2.5
NESP48681 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC30.67■■■□□ 2.5
NESP48681 AL512356.2-201ENST00000546955 174 ntBASIC30.67■■■□□ 2.5
NESP48681 CR383656.12-201ENST00000549567 513 ntBASIC30.67■■■□□ 2.5
NESP48681 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC30.67■■■□□ 2.5
NESP48681 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC30.67■■■□□ 2.5
NESP48681 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC30.67■■■□□ 2.5
NESP48681 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC30.67■■■□□ 2.5
NESP48681 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NESP48681 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NESP48681 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
NESP48681 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
NESP48681 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
NESP48681 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NESP48681 FUT8-AS1-201ENST00000621019 1521 ntBASIC30.67■■■□□ 2.5
NESP48681 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC30.67■■■□□ 2.5
NESP48681 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NESP48681 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NESP48681 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NESP48681 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NESP48681 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC30.66■■■□□ 2.5
NESP48681 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC30.66■■■□□ 2.5
NESP48681 AC069335.1-201ENST00000489972 472 ntBASIC30.66■■■□□ 2.5
NESP48681 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NESP48681 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC30.66■■■□□ 2.5
NESP48681 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
NESP48681 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
NESP48681 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NESP48681 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC30.66■■■□□ 2.5
NESP48681 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NESP48681 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NESP48681 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NESP48681 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NESP48681 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC30.65■■■□□ 2.5
NESP48681 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC30.65■■■□□ 2.5
NESP48681 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
NESP48681 AC026120.1-201ENST00000611536 926 ntBASIC30.65■■■□□ 2.5
NESP48681 GGTLC5P-201ENST00000617623 998 ntBASIC30.65■■■□□ 2.5
NESP48681 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NESP48681 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NESP48681 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NESP48681 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NESP48681 VMA21-202ENST00000370361 693 ntTSL 5 BASIC30.65■■■□□ 2.5
NESP48681 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
NESP48681 AC107890.1-201ENST00000422478 521 ntBASIC30.65■■■□□ 2.5
NESP48681 KRT18P32-201ENST00000424695 1287 ntBASIC30.65■■■□□ 2.5
NESP48681 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NESP48681 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC30.65■■■□□ 2.5
NESP48681 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC30.65■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms