Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX5P45973 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX5P45973 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CBX5P45973 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX5P45973 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX5P45973 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX5P45973 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX5P45973 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX5P45973 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX5P45973 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.5■□□□□ 0.07
CBX5P45973 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CBX5P45973 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.5■□□□□ 0.07
CBX5P45973 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.5■□□□□ 0.07
CBX5P45973 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CBX5P45973 AC004951.3-201ENST00000418645 1148 ntBASIC15.5■□□□□ 0.07
CBX5P45973 AC004980.1-204ENST00000429707 299 ntBASIC15.5■□□□□ 0.07
CBX5P45973 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.5■□□□□ 0.07
CBX5P45973 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.5■□□□□ 0.07
CBX5P45973 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.5■□□□□ 0.07
CBX5P45973 MTDHP1-201ENST00000605323 784 ntBASIC15.5■□□□□ 0.07
CBX5P45973 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.5■□□□□ 0.07
CBX5P45973 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CBX5P45973 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
CBX5P45973 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.5■□□□□ 0.07
CBX5P45973 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 AL645608.8-201ENST00000606034 2086 ntBASIC15.5■□□□□ 0.07
CBX5P45973 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.5■□□□□ 0.07
CBX5P45973 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.5■□□□□ 0.07
CBX5P45973 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CBX5P45973 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.49■□□□□ 0.07
CBX5P45973 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 AC006116.8-202ENST00000587620 1550 ntBASIC15.49■□□□□ 0.07
CBX5P45973 PHGDH-209ENST00000641074 1780 ntBASIC15.49■□□□□ 0.07
CBX5P45973 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.49■□□□□ 0.07
CBX5P45973 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
CBX5P45973 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CBX5P45973 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CBX5P45973 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CBX5P45973 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CBX5P45973 MIR564-202ENST00000385049 94 ntBASIC15.49■□□□□ 0.07
CBX5P45973 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.49■□□□□ 0.07
CBX5P45973 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.49■□□□□ 0.07
CBX5P45973 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.49■□□□□ 0.07
CBX5P45973 KRT17P3-201ENST00000420566 1262 ntBASIC15.49■□□□□ 0.07
CBX5P45973 AC091390.4-202ENST00000476426 537 ntBASIC15.49■□□□□ 0.07
CBX5P45973 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.49■□□□□ 0.07
CBX5P45973 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CBX5P45973 CKBP1-201ENST00000565489 1086 ntBASIC15.49■□□□□ 0.07
CBX5P45973 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.49■□□□□ 0.07
CBX5P45973 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.49■□□□□ 0.07
CBX5P45973 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.49■□□□□ 0.07
CBX5P45973 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.49■□□□□ 0.07
CBX5P45973 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CBX5P45973 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CBX5P45973 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.48■□□□□ 0.07
CBX5P45973 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.48■□□□□ 0.07
CBX5P45973 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CBX5P45973 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CBX5P45973 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms