Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.83□□□□□ -0.04
SNCAP37840 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.83□□□□□ -0.04
SNCAP37840 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SNCAP37840 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SNCAP37840 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.83□□□□□ -0.04
SNCAP37840 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 KRT16P1-201ENST00000399124 1418 ntBASIC14.83□□□□□ -0.04
SNCAP37840 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SNCAP37840 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.82□□□□□ -0.04
SNCAP37840 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SNCAP37840 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.82□□□□□ -0.04
SNCAP37840 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.82□□□□□ -0.04
SNCAP37840 AC091390.4-202ENST00000476426 537 ntBASIC14.82□□□□□ -0.04
SNCAP37840 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.82□□□□□ -0.04
SNCAP37840 KRT18P6-201ENST00000555540 1265 ntBASIC14.82□□□□□ -0.04
SNCAP37840 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.82□□□□□ -0.04
SNCAP37840 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.82□□□□□ -0.04
SNCAP37840 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SNCAP37840 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.82□□□□□ -0.04
SNCAP37840 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.82□□□□□ -0.04
SNCAP37840 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SNCAP37840 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNCAP37840 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
SNCAP37840 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.82□□□□□ -0.04
SNCAP37840 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.81□□□□□ -0.04
SNCAP37840 REXO1L9P-201ENST00000604264 2108 ntBASIC14.81□□□□□ -0.04
SNCAP37840 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.81□□□□□ -0.04
SNCAP37840 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SNCAP37840 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.81□□□□□ -0.04
SNCAP37840 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
SNCAP37840 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.81□□□□□ -0.04
SNCAP37840 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.81□□□□□ -0.04
SNCAP37840 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.81□□□□□ -0.04
SNCAP37840 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.81□□□□□ -0.04
SNCAP37840 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.81□□□□□ -0.04
SNCAP37840 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.81□□□□□ -0.04
SNCAP37840 AC026271.3-201ENST00000571884 352 ntBASIC14.81□□□□□ -0.04
SNCAP37840 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 AC006058.3-201ENST00000606217 1069 ntBASIC14.81□□□□□ -0.04
SNCAP37840 AC011298.2-201ENST00000617989 482 ntBASIC14.81□□□□□ -0.04
SNCAP37840 CR392000.1-201ENST00000624770 1228 ntBASIC14.81□□□□□ -0.04
SNCAP37840 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SNCAP37840 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.81□□□□□ -0.04
SNCAP37840 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 KRT8P45-201ENST00000414328 1447 ntBASIC14.81□□□□□ -0.04
SNCAP37840 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
SNCAP37840 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.81□□□□□ -0.04
SNCAP37840 RCC2P3-201ENST00000418112 1537 ntBASIC14.81□□□□□ -0.04
SNCAP37840 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SNCAP37840 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
SNCAP37840 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms