Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 KRT18P3-201ENST00000451602 1288 ntBASIC20.41■□□□□ 0.86
CNGA1P29973 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.41■□□□□ 0.86
CNGA1P29973 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.41■□□□□ 0.86
CNGA1P29973 RNA5SP415-201ENST00000517246 115 ntBASIC20.41■□□□□ 0.86
CNGA1P29973 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.41■□□□□ 0.86
CNGA1P29973 MIR3687-2-201ENST00000577708 61 ntBASIC20.41■□□□□ 0.86
CNGA1P29973 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.41■□□□□ 0.86
CNGA1P29973 AC011467.2-201ENST00000598425 242 ntBASIC20.41■□□□□ 0.86
CNGA1P29973 MIR3687-1-201ENST00000614492 61 ntBASIC20.41■□□□□ 0.86
CNGA1P29973 AC009154.2-201ENST00000621177 724 ntBASIC20.41■□□□□ 0.86
CNGA1P29973 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNGA1P29973 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.41■□□□□ 0.86
CNGA1P29973 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.41■□□□□ 0.86
CNGA1P29973 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNGA1P29973 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNGA1P29973 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNGA1P29973 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.41■□□□□ 0.86
CNGA1P29973 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNGA1P29973 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNGA1P29973 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNGA1P29973 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.41■□□□□ 0.86
CNGA1P29973 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNGA1P29973 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNGA1P29973 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNGA1P29973 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNGA1P29973 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNGA1P29973 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNGA1P29973 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CNGA1P29973 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNGA1P29973 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CNGA1P29973 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.4■□□□□ 0.86
CNGA1P29973 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.4■□□□□ 0.86
CNGA1P29973 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNGA1P29973 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CNGA1P29973 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNGA1P29973 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNGA1P29973 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CNGA1P29973 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CNGA1P29973 ANO7L1-203ENST00000602586 1720 ntBASIC20.4■□□□□ 0.86
CNGA1P29973 Z83851.2-201ENST00000609564 659 ntBASIC20.4■□□□□ 0.86
CNGA1P29973 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.4■□□□□ 0.86
CNGA1P29973 LINC00602-201ENST00000629776 2065 ntBASIC20.4■□□□□ 0.86
CNGA1P29973 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.4■□□□□ 0.86
CNGA1P29973 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNGA1P29973 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNGA1P29973 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CNGA1P29973 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNGA1P29973 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNGA1P29973 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNGA1P29973 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CNGA1P29973 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNGA1P29973 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNGA1P29973 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.39■□□□□ 0.86
CNGA1P29973 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNGA1P29973 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.39■□□□□ 0.86
CNGA1P29973 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNGA1P29973 AC125634.1-201ENST00000438758 1403 ntBASIC20.39■□□□□ 0.85
CNGA1P29973 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNGA1P29973 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNGA1P29973 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNGA1P29973 RPSAP43-201ENST00000402237 625 ntBASIC20.39■□□□□ 0.85
CNGA1P29973 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.39■□□□□ 0.85
CNGA1P29973 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNGA1P29973 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.39■□□□□ 0.85
CNGA1P29973 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.39■□□□□ 0.85
CNGA1P29973 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.39■□□□□ 0.85
CNGA1P29973 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CNGA1P29973 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNGA1P29973 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.39■□□□□ 0.85
CNGA1P29973 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNGA1P29973 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNGA1P29973 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNGA1P29973 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNGA1P29973 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNGA1P29973 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CNGA1P29973 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 AL499627.1-201ENST00000569373 2188 ntBASIC20.38■□□□□ 0.85
CNGA1P29973 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 HMGN1P19-201ENST00000436976 333 ntBASIC20.38■□□□□ 0.85
CNGA1P29973 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.38■□□□□ 0.85
CNGA1P29973 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.38■□□□□ 0.85
CNGA1P29973 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.38■□□□□ 0.85
CNGA1P29973 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.38■□□□□ 0.85
CNGA1P29973 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.38■□□□□ 0.85
CNGA1P29973 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.38■□□□□ 0.85
CNGA1P29973 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.38■□□□□ 0.85
CNGA1P29973 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.38■□□□□ 0.85
CNGA1P29973 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.38■□□□□ 0.85
CNGA1P29973 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNGA1P29973 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms