Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMLP26374 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMLP26374 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.67■■□□□ 1.06
CHMLP26374 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMLP26374 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMLP26374 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMLP26374 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMLP26374 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMLP26374 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMLP26374 AL390719.2-201ENST00000606993 987 ntBASIC21.67■■□□□ 1.06
CHMLP26374 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CHMLP26374 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMLP26374 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMLP26374 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMLP26374 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHMLP26374 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CHMLP26374 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CHMLP26374 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMLP26374 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMLP26374 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.66■■□□□ 1.06
CHMLP26374 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.66■■□□□ 1.06
CHMLP26374 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMLP26374 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CHMLP26374 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.66■■□□□ 1.06
CHMLP26374 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.66■■□□□ 1.06
CHMLP26374 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.66■■□□□ 1.06
CHMLP26374 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.66■■□□□ 1.06
CHMLP26374 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.66■■□□□ 1.06
CHMLP26374 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMLP26374 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CHMLP26374 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CHMLP26374 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMLP26374 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CHMLP26374 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMLP26374 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMLP26374 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMLP26374 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CHMLP26374 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMLP26374 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMLP26374 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMLP26374 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMLP26374 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMLP26374 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMLP26374 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMLP26374 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMLP26374 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMLP26374 AL671277.2-201ENST00000458060 996 ntBASIC21.65■■□□□ 1.06
CHMLP26374 AC112698.1-201ENST00000510299 916 ntBASIC21.65■■□□□ 1.06
CHMLP26374 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMLP26374 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMLP26374 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMLP26374 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMLP26374 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.65■■□□□ 1.06
CHMLP26374 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CHMLP26374 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMLP26374 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.65■■□□□ 1.06
CHMLP26374 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CHMLP26374 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.64■■□□□ 1.06
CHMLP26374 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHMLP26374 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHMLP26374 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMLP26374 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMLP26374 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHMLP26374 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMLP26374 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.64■■□□□ 1.05
CHMLP26374 AC068472.1-201ENST00000474589 881 ntBASIC21.64■■□□□ 1.05
CHMLP26374 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.64■■□□□ 1.05
CHMLP26374 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.64■■□□□ 1.05
CHMLP26374 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.64■■□□□ 1.05
CHMLP26374 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.64■■□□□ 1.05
CHMLP26374 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMLP26374 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.64■■□□□ 1.05
CHMLP26374 REXO1L11P-201ENST00000620964 1927 ntBASIC21.64■■□□□ 1.05
CHMLP26374 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.64■■□□□ 1.05
CHMLP26374 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMLP26374 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMLP26374 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMLP26374 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.64■■□□□ 1.05
CHMLP26374 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMLP26374 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMLP26374 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMLP26374 Z83836.1-201ENST00000624605 1642 ntBASIC21.63■■□□□ 1.05
CHMLP26374 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMLP26374 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMLP26374 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMLP26374 LINC00304-203ENST00000565008 1864 ntBASIC21.63■■□□□ 1.05
CHMLP26374 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.63■■□□□ 1.05
CHMLP26374 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMLP26374 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMLP26374 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMLP26374 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMLP26374 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.63■■□□□ 1.05
CHMLP26374 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMLP26374 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMLP26374 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CHMLP26374 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMLP26374 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.63■■□□□ 1.05
CHMLP26374 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMLP26374 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMLP26374 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms