Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CHMP24386 AC034232.1-201ENST00000506026 1064 ntBASIC16.83■□□□□ 0.28
CHMP24386 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.83■□□□□ 0.28
CHMP24386 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.83■□□□□ 0.28
CHMP24386 AC034236.2-201ENST00000606662 1610 ntBASIC16.83■□□□□ 0.28
CHMP24386 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP24386 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP24386 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.83■□□□□ 0.28
CHMP24386 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP24386 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 AC009053.2-201ENST00000563701 2365 ntBASIC16.82■□□□□ 0.28
CHMP24386 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP24386 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CHMP24386 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 AL096828.2-201ENST00000567259 1965 ntBASIC16.82■□□□□ 0.28
CHMP24386 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP24386 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP24386 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP24386 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.82■□□□□ 0.28
CHMP24386 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHMP24386 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHMP24386 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CHMP24386 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 AL645608.8-201ENST00000606034 2086 ntBASIC16.82■□□□□ 0.28
CHMP24386 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP24386 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHMP24386 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHMP24386 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP24386 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHMP24386 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHMP24386 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP24386 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHMP24386 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.81■□□□□ 0.28
CHMP24386 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.81■□□□□ 0.28
CHMP24386 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.81■□□□□ 0.28
CHMP24386 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP24386 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP24386 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.81■□□□□ 0.28
CHMP24386 KRT18P23-201ENST00000435622 1283 ntBASIC16.81■□□□□ 0.28
CHMP24386 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHMP24386 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP24386 AC024243.1-201ENST00000609234 778 ntBASIC16.81■□□□□ 0.28
CHMP24386 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CHMP24386 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CHMP24386 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.81■□□□□ 0.28
CHMP24386 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CHMP24386 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHMP24386 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP24386 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHMP24386 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CHMP24386 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP24386 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.8■□□□□ 0.28
CHMP24386 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP24386 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP24386 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP24386 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms