Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
BRAFP15056 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
BRAFP15056 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.5■□□□□ 0.55
BRAFP15056 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.5■□□□□ 0.55
BRAFP15056 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
BRAFP15056 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.5■□□□□ 0.55
BRAFP15056 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.5■□□□□ 0.55
BRAFP15056 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
BRAFP15056 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
BRAFP15056 MIR4674-201ENST00000582457 87 ntBASIC18.5■□□□□ 0.55
BRAFP15056 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
BRAFP15056 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.5■□□□□ 0.55
BRAFP15056 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.5■□□□□ 0.55
BRAFP15056 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
BRAFP15056 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.5■□□□□ 0.55
BRAFP15056 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.5■□□□□ 0.55
BRAFP15056 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.5■□□□□ 0.55
BRAFP15056 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.49■□□□□ 0.55
BRAFP15056 RCC2P3-201ENST00000418112 1537 ntBASIC18.49■□□□□ 0.55
BRAFP15056 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
BRAFP15056 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
BRAFP15056 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.49■□□□□ 0.55
BRAFP15056 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.49■□□□□ 0.55
BRAFP15056 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
BRAFP15056 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 LIN28AP1-201ENST00000429574 405 ntBASIC18.49■□□□□ 0.55
BRAFP15056 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
BRAFP15056 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.49■□□□□ 0.55
BRAFP15056 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.49■□□□□ 0.55
BRAFP15056 AC006116.8-202ENST00000587620 1550 ntBASIC18.49■□□□□ 0.55
BRAFP15056 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRAFP15056 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
BRAFP15056 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRAFP15056 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.48■□□□□ 0.55
BRAFP15056 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRAFP15056 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
BRAFP15056 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRAFP15056 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRAFP15056 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
BRAFP15056 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRAFP15056 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRAFP15056 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.48■□□□□ 0.55
BRAFP15056 ATP5G1P1-201ENST00000448724 379 ntBASIC18.48■□□□□ 0.55
BRAFP15056 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.48■□□□□ 0.55
BRAFP15056 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.48■□□□□ 0.55
BRAFP15056 AC006011.2-201ENST00000621313 1158 ntBASIC18.48■□□□□ 0.55
BRAFP15056 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
BRAFP15056 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRAFP15056 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRAFP15056 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRAFP15056 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
BRAFP15056 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRAFP15056 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
BRAFP15056 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
BRAFP15056 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.48■□□□□ 0.55
BRAFP15056 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.48■□□□□ 0.55
BRAFP15056 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRAFP15056 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
BRAFP15056 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.47■□□□□ 0.55
BRAFP15056 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.47■□□□□ 0.55
BRAFP15056 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRAFP15056 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.47■□□□□ 0.55
BRAFP15056 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.47■□□□□ 0.55
BRAFP15056 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRAFP15056 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.47■□□□□ 0.55
BRAFP15056 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.47■□□□□ 0.55
BRAFP15056 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
BRAFP15056 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRAFP15056 MIR1224-201ENST00000408193 85 ntBASIC18.47■□□□□ 0.55
BRAFP15056 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
BRAFP15056 AC104076.2-201ENST00000448912 469 ntBASIC18.47■□□□□ 0.55
BRAFP15056 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRAFP15056 KRT18P41-201ENST00000518924 1277 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms