Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBL4AP11441 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 FLJ13224-201ENST00000313737 1514 ntBASIC16.65■□□□□ 0.26
UBL4AP11441 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.65■□□□□ 0.26
UBL4AP11441 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBL4AP11441 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.65■□□□□ 0.26
UBL4AP11441 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 RCN1P1-201ENST00000400413 996 ntBASIC16.65■□□□□ 0.26
UBL4AP11441 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.65■□□□□ 0.26
UBL4AP11441 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBL4AP11441 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.65■□□□□ 0.26
UBL4AP11441 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.65■□□□□ 0.26
UBL4AP11441 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.65■□□□□ 0.26
UBL4AP11441 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 RN7SL850P-201ENST00000579959 291 ntBASIC16.65■□□□□ 0.26
UBL4AP11441 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.65■□□□□ 0.26
UBL4AP11441 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBL4AP11441 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.65■□□□□ 0.26
UBL4AP11441 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBL4AP11441 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBL4AP11441 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.65■□□□□ 0.26
UBL4AP11441 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.26
UBL4AP11441 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
UBL4AP11441 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 AL391807.1-203ENST00000604392 2365 ntBASIC16.64■□□□□ 0.25
UBL4AP11441 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBL4AP11441 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.64■□□□□ 0.25
UBL4AP11441 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 FAM8A6P-201ENST00000407496 1135 ntBASIC16.64■□□□□ 0.25
UBL4AP11441 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.64■□□□□ 0.25
UBL4AP11441 AL359075.1-203ENST00000462729 1002 ntBASIC16.64■□□□□ 0.25
UBL4AP11441 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
UBL4AP11441 AC079602.3-201ENST00000623931 403 ntBASIC16.64■□□□□ 0.25
UBL4AP11441 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.64■□□□□ 0.25
UBL4AP11441 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.64■□□□□ 0.25
UBL4AP11441 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.64■□□□□ 0.25
UBL4AP11441 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
UBL4AP11441 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBL4AP11441 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.63■□□□□ 0.25
UBL4AP11441 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
UBL4AP11441 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.63■□□□□ 0.25
UBL4AP11441 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
UBL4AP11441 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 TMPOP1-202ENST00000424642 1267 ntBASIC16.63■□□□□ 0.25
UBL4AP11441 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.63■□□□□ 0.25
UBL4AP11441 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.63■□□□□ 0.25
UBL4AP11441 AC024563.2-201ENST00000603282 481 ntBASIC16.63■□□□□ 0.25
UBL4AP11441 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
UBL4AP11441 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
UBL4AP11441 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.63■□□□□ 0.25
UBL4AP11441 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.63■□□□□ 0.25
UBL4AP11441 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms