Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 MIR3917-201ENST00000580971 93 ntBASIC19.46■□□□□ 0.71
CCDC172P0C7W6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC172P0C7W6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 AC008894.3-201ENST00000624324 3103 ntBASIC19.45■□□□□ 0.7
CCDC172P0C7W6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 FAM87A-204ENST00000613235 858 ntBASIC19.45■□□□□ 0.7
CCDC172P0C7W6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 LINC00896-202ENST00000609602 2128 ntBASIC19.45■□□□□ 0.7
CCDC172P0C7W6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC172P0C7W6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 KRT8P9-201ENST00000558927 1449 ntBASIC19.44■□□□□ 0.7
CCDC172P0C7W6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 ECEL1P2-202ENST00000465689 757 ntBASIC19.44■□□□□ 0.7
CCDC172P0C7W6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC172P0C7W6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms