Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RBP1P09455 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RBP1P09455 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RBP1P09455 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.74■□□□□ 0.43
RBP1P09455 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.74■□□□□ 0.43
RBP1P09455 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.74■□□□□ 0.43
RBP1P09455 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.73■□□□□ 0.43
RBP1P09455 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.73■□□□□ 0.43
RBP1P09455 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RBP1P09455 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.73■□□□□ 0.43
RBP1P09455 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RBP1P09455 AP000523.1-201ENST00000398242 1049 ntBASIC17.73■□□□□ 0.43
RBP1P09455 PVRIG2P-201ENST00000435460 978 ntBASIC17.73■□□□□ 0.43
RBP1P09455 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.73■□□□□ 0.43
RBP1P09455 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.73■□□□□ 0.43
RBP1P09455 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.73■□□□□ 0.43
RBP1P09455 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RBP1P09455 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.73■□□□□ 0.43
RBP1P09455 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.73■□□□□ 0.43
RBP1P09455 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
RBP1P09455 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.73■□□□□ 0.43
RBP1P09455 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RBP1P09455 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RBP1P09455 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RBP1P09455 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RBP1P09455 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RBP1P09455 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.72■□□□□ 0.43
RBP1P09455 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.72■□□□□ 0.43
RBP1P09455 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.72■□□□□ 0.43
RBP1P09455 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.72■□□□□ 0.43
RBP1P09455 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.72■□□□□ 0.43
RBP1P09455 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.72■□□□□ 0.43
RBP1P09455 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RBP1P09455 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.72■□□□□ 0.43
RBP1P09455 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.72■□□□□ 0.43
RBP1P09455 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.72■□□□□ 0.43
RBP1P09455 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.72■□□□□ 0.43
RBP1P09455 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.72■□□□□ 0.43
RBP1P09455 FAM87A-204ENST00000613235 858 ntBASIC17.72■□□□□ 0.43
RBP1P09455 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RBP1P09455 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.72■□□□□ 0.43
RBP1P09455 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.72■□□□□ 0.43
RBP1P09455 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.72■□□□□ 0.43
RBP1P09455 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBP1P09455 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RBP1P09455 KRT8P9-201ENST00000558927 1449 ntBASIC17.72■□□□□ 0.43
RBP1P09455 AL355312.1-201ENST00000407115 2176 ntBASIC17.72■□□□□ 0.43
RBP1P09455 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
RBP1P09455 AC139713.2-201ENST00000641328 2723 ntBASIC17.71■□□□□ 0.43
RBP1P09455 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RBP1P09455 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RBP1P09455 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
RBP1P09455 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RBP1P09455 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
RBP1P09455 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RBP1P09455 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RBP1P09455 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RBP1P09455 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.71■□□□□ 0.43
RBP1P09455 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.71■□□□□ 0.43
RBP1P09455 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.71■□□□□ 0.43
RBP1P09455 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.71■□□□□ 0.43
RBP1P09455 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.71■□□□□ 0.43
RBP1P09455 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.71■□□□□ 0.43
RBP1P09455 AC116407.2-201ENST00000613639 860 ntBASIC17.71■□□□□ 0.43
RBP1P09455 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.71■□□□□ 0.43
RBP1P09455 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.71■□□□□ 0.43
RBP1P09455 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RBP1P09455 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
RBP1P09455 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
RBP1P09455 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms