Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RETP07949 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RETP07949 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RETP07949 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.11■□□□□ 0.49
RETP07949 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
RETP07949 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RETP07949 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.11■□□□□ 0.49
RETP07949 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RETP07949 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RETP07949 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.1■□□□□ 0.49
RETP07949 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.1■□□□□ 0.49
RETP07949 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.1■□□□□ 0.49
RETP07949 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.1■□□□□ 0.49
RETP07949 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.1■□□□□ 0.49
RETP07949 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.1■□□□□ 0.49
RETP07949 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.1■□□□□ 0.49
RETP07949 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.1■□□□□ 0.49
RETP07949 AC004832.2-201ENST00000426397 482 ntBASIC18.1■□□□□ 0.49
RETP07949 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.1■□□□□ 0.49
RETP07949 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.1■□□□□ 0.49
RETP07949 RNA5SP415-201ENST00000517246 115 ntBASIC18.1■□□□□ 0.49
RETP07949 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.1■□□□□ 0.49
RETP07949 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.1■□□□□ 0.49
RETP07949 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.1■□□□□ 0.49
RETP07949 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.1■□□□□ 0.49
RETP07949 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.1■□□□□ 0.49
RETP07949 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.1■□□□□ 0.49
RETP07949 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.1■□□□□ 0.49
RETP07949 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RETP07949 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RETP07949 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RETP07949 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.09■□□□□ 0.49
RETP07949 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RETP07949 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.09■□□□□ 0.49
RETP07949 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.09■□□□□ 0.49
RETP07949 RPS2P1-201ENST00000434010 821 ntBASIC18.09■□□□□ 0.49
RETP07949 DNAJB3-202ENST00000449667 1266 ntBASIC18.09■□□□□ 0.49
RETP07949 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.09■□□□□ 0.49
RETP07949 RNA5SP416-201ENST00000516838 111 ntBASIC18.09■□□□□ 0.49
RETP07949 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.09■□□□□ 0.49
RETP07949 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.09■□□□□ 0.49
RETP07949 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.09■□□□□ 0.49
RETP07949 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.09■□□□□ 0.49
RETP07949 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.09■□□□□ 0.49
RETP07949 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.09■□□□□ 0.49
RETP07949 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RETP07949 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.09■□□□□ 0.49
RETP07949 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RETP07949 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RETP07949 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.08■□□□□ 0.49
RETP07949 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RETP07949 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RETP07949 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RETP07949 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RETP07949 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RETP07949 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RETP07949 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RETP07949 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
RETP07949 KRT8P32-201ENST00000512863 1461 ntBASIC18.08■□□□□ 0.49
RETP07949 AC112777.1-201ENST00000540175 1423 ntBASIC18.08■□□□□ 0.49
RETP07949 FP475955.4-201ENST00000623131 1990 ntBASIC18.08■□□□□ 0.49
RETP07949 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
RETP07949 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RETP07949 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RETP07949 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RETP07949 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms