Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.81■□□□□ 0.28
PDGFAP04085 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PDGFAP04085 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFAP04085 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFAP04085 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDGFAP04085 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.8■□□□□ 0.28
PDGFAP04085 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFAP04085 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDGFAP04085 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.8■□□□□ 0.28
PDGFAP04085 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.8■□□□□ 0.28
PDGFAP04085 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDGFAP04085 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PDGFAP04085 AC132008.2-207ENST00000454517 770 ntBASIC16.8■□□□□ 0.28
PDGFAP04085 AF186996.4-201ENST00000467186 377 ntBASIC16.8■□□□□ 0.28
PDGFAP04085 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFAP04085 KRT18P58-201ENST00000527480 1120 ntBASIC16.8■□□□□ 0.28
PDGFAP04085 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.8■□□□□ 0.28
PDGFAP04085 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.8■□□□□ 0.28
PDGFAP04085 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFAP04085 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.8■□□□□ 0.28
PDGFAP04085 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.8■□□□□ 0.28
PDGFAP04085 MIR7706-201ENST00000613747 67 ntBASIC16.8■□□□□ 0.28
PDGFAP04085 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFAP04085 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFAP04085 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFAP04085 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFAP04085 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PDGFAP04085 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 TNRC18P3-201ENST00000441896 2691 ntBASIC16.79■□□□□ 0.28
PDGFAP04085 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 FP475955.4-201ENST00000623131 1990 ntBASIC16.79■□□□□ 0.28
PDGFAP04085 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFAP04085 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFAP04085 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 AC092865.5-201ENST00000545435 363 ntBASIC16.79■□□□□ 0.28
PDGFAP04085 AC106730.1-201ENST00000566722 1090 ntBASIC16.79■□□□□ 0.28
PDGFAP04085 AC008608.2-201ENST00000606089 416 ntBASIC16.79■□□□□ 0.28
PDGFAP04085 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.79■□□□□ 0.28
PDGFAP04085 AC114341.1-201ENST00000618070 349 ntBASIC16.79■□□□□ 0.28
PDGFAP04085 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PDGFAP04085 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFAP04085 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PDGFAP04085 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.78■□□□□ 0.28
PDGFAP04085 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PDGFAP04085 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PDGFAP04085 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDGFAP04085 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PDGFAP04085 AC018712.1-201ENST00000455767 687 ntBASIC16.78■□□□□ 0.28
PDGFAP04085 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.78■□□□□ 0.28
PDGFAP04085 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.78■□□□□ 0.28
PDGFAP04085 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.78■□□□□ 0.28
PDGFAP04085 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.78■□□□□ 0.28
PDGFAP04085 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms