Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-ND1P03886 FSCN1P1-201ENST00000568912 1481 ntBASIC16.99■□□□□ 0.31
MT-ND1P03886 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MT-ND1P03886 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-ND1P03886 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-ND1P03886 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-ND1P03886 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-ND1P03886 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
MT-ND1P03886 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MT-ND1P03886 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-ND1P03886 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
MT-ND1P03886 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-ND1P03886 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MT-ND1P03886 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-ND1P03886 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 GPAT2P1-201ENST00000444924 1672 ntBASIC16.99■□□□□ 0.31
MT-ND1P03886 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-ND1P03886 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
MT-ND1P03886 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
MT-ND1P03886 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MT-ND1P03886 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND1P03886 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND1P03886 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-ND1P03886 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-ND1P03886 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
MT-ND1P03886 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.98■□□□□ 0.31
MT-ND1P03886 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-ND1P03886 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND1P03886 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND1P03886 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND1P03886 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND1P03886 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-ND1P03886 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.98■□□□□ 0.31
MT-ND1P03886 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
MT-ND1P03886 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND1P03886 AL023284.2-201ENST00000405850 579 ntBASIC16.98■□□□□ 0.31
MT-ND1P03886 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.98■□□□□ 0.31
MT-ND1P03886 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.98■□□□□ 0.31
MT-ND1P03886 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-ND1P03886 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.98■□□□□ 0.31
MT-ND1P03886 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-ND1P03886 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-ND1P03886 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MT-ND1P03886 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-ND1P03886 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND1P03886 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND1P03886 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
MT-ND1P03886 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND1P03886 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
MT-ND1P03886 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-ND1P03886 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
MT-ND1P03886 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-ND1P03886 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND1P03886 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND1P03886 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND1P03886 CROCCP2-202ENST00000412962 2773 ntBASIC16.98■□□□□ 0.31
MT-ND1P03886 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-ND1P03886 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-ND1P03886 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-ND1P03886 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MT-ND1P03886 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND1P03886 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND1P03886 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MT-ND1P03886 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MT-ND1P03886 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-ND1P03886 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.97■□□□□ 0.31
MT-ND1P03886 TSPY20P-201ENST00000450910 630 ntBASIC16.97■□□□□ 0.31
MT-ND1P03886 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND1P03886 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.97■□□□□ 0.31
MT-ND1P03886 AP000692.2-201ENST00000608391 879 ntBASIC16.97■□□□□ 0.31
MT-ND1P03886 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MT-ND1P03886 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-ND1P03886 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND1P03886 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms