Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
MBD3O95983 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.63■□□□□ 0.89
MBD3O95983 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.63■□□□□ 0.89
MBD3O95983 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
MBD3O95983 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
MBD3O95983 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.63■□□□□ 0.89
MBD3O95983 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MBD3O95983 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.62■□□□□ 0.89
MBD3O95983 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3O95983 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.62■□□□□ 0.89
MBD3O95983 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.62■□□□□ 0.89
MBD3O95983 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
MBD3O95983 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.62■□□□□ 0.89
MBD3O95983 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
MBD3O95983 AC096733.2-201ENST00000609937 1394 ntBASIC20.62■□□□□ 0.89
MBD3O95983 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.62■□□□□ 0.89
MBD3O95983 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3O95983 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3O95983 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3O95983 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3O95983 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3O95983 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3O95983 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3O95983 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3O95983 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.62■□□□□ 0.89
MBD3O95983 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.62■□□□□ 0.89
MBD3O95983 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.62■□□□□ 0.89
MBD3O95983 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3O95983 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.62■□□□□ 0.89
MBD3O95983 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
MBD3O95983 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3O95983 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
MBD3O95983 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.62■□□□□ 0.89
MBD3O95983 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3O95983 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3O95983 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
MBD3O95983 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
MBD3O95983 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3O95983 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
MBD3O95983 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
MBD3O95983 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
MBD3O95983 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.61■□□□□ 0.89
MBD3O95983 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3O95983 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
MBD3O95983 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.61■□□□□ 0.89
MBD3O95983 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.61■□□□□ 0.89
MBD3O95983 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.61■□□□□ 0.89
MBD3O95983 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3O95983 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
MBD3O95983 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3O95983 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3O95983 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3O95983 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3O95983 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.61■□□□□ 0.89
MBD3O95983 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3O95983 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3O95983 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3O95983 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3O95983 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.6■□□□□ 0.89
MBD3O95983 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3O95983 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3O95983 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.6■□□□□ 0.89
MBD3O95983 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3O95983 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MBD3O95983 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
MBD3O95983 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MBD3O95983 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MBD3O95983 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
MBD3O95983 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.6■□□□□ 0.89
MBD3O95983 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3O95983 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MBD3O95983 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.6■□□□□ 0.89
MBD3O95983 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3O95983 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3O95983 AC132938.6-201ENST00000623828 1655 ntBASIC20.6■□□□□ 0.89
MBD3O95983 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.6■□□□□ 0.89
MBD3O95983 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3O95983 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MBD3O95983 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3O95983 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.6■□□□□ 0.89
MBD3O95983 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
MBD3O95983 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MBD3O95983 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.59■□□□□ 0.89
MBD3O95983 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
MBD3O95983 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MBD3O95983 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
MBD3O95983 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
MBD3O95983 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.59■□□□□ 0.89
MBD3O95983 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms