Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.27■□□□□ 0.2
PPP1R3DO95685 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PPP1R3DO95685 AC100803.2-201ENST00000562459 1963 ntBASIC16.27■□□□□ 0.19
PPP1R3DO95685 CYP2D8P-201ENST00000433633 1490 ntBASIC16.27■□□□□ 0.19
PPP1R3DO95685 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PPP1R3DO95685 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PPP1R3DO95685 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
PPP1R3DO95685 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PPP1R3DO95685 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PPP1R3DO95685 KRT8P9-201ENST00000558927 1449 ntBASIC16.27■□□□□ 0.19
PPP1R3DO95685 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PPP1R3DO95685 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PPP1R3DO95685 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 TSPY15P-201ENST00000457163 923 ntBASIC16.26■□□□□ 0.19
PPP1R3DO95685 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP1R3DO95685 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PPP1R3DO95685 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 AC141586.5-201ENST00000624546 2050 ntBASIC16.25■□□□□ 0.19
PPP1R3DO95685 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 AC128688.1-201ENST00000487626 519 ntBASIC16.25■□□□□ 0.19
PPP1R3DO95685 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP1R3DO95685 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PPP1R3DO95685 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 AL355312.1-201ENST00000407115 2176 ntBASIC16.24■□□□□ 0.19
PPP1R3DO95685 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms