Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
BEST1O76090 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BEST1O76090 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
BEST1O76090 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 AC007613.1-201ENST00000572811 2597 ntBASIC18.85■□□□□ 0.61
BEST1O76090 FLJ13224-201ENST00000313737 1514 ntBASIC18.84■□□□□ 0.61
BEST1O76090 AL390961.4-201ENST00000623958 2535 ntBASIC18.84■□□□□ 0.61
BEST1O76090 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.84■□□□□ 0.61
BEST1O76090 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.84■□□□□ 0.61
BEST1O76090 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BEST1O76090 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.84■□□□□ 0.61
BEST1O76090 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.84■□□□□ 0.61
BEST1O76090 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.84■□□□□ 0.61
BEST1O76090 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.84■□□□□ 0.61
BEST1O76090 AC091304.2-201ENST00000564639 760 ntBASIC18.84■□□□□ 0.61
BEST1O76090 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BEST1O76090 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 IFNL4P1-201ENST00000607083 540 ntBASIC18.84■□□□□ 0.61
BEST1O76090 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BEST1O76090 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.84■□□□□ 0.61
BEST1O76090 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.84■□□□□ 0.61
BEST1O76090 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST1O76090 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.83■□□□□ 0.61
BEST1O76090 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BEST1O76090 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BEST1O76090 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BEST1O76090 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
BEST1O76090 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.83■□□□□ 0.61
BEST1O76090 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
BEST1O76090 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BEST1O76090 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.83■□□□□ 0.61
BEST1O76090 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.83■□□□□ 0.6
BEST1O76090 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST1O76090 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST1O76090 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST1O76090 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST1O76090 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.83■□□□□ 0.6
BEST1O76090 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.83■□□□□ 0.6
BEST1O76090 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.83■□□□□ 0.6
BEST1O76090 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.83■□□□□ 0.6
BEST1O76090 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.83■□□□□ 0.6
BEST1O76090 AL121772.3-201ENST00000610840 674 ntBASIC18.83■□□□□ 0.6
BEST1O76090 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.83■□□□□ 0.6
BEST1O76090 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.83■□□□□ 0.6
BEST1O76090 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BEST1O76090 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
BEST1O76090 AC010460.3-201ENST00000511359 1579 ntBASIC18.83■□□□□ 0.6
BEST1O76090 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
BEST1O76090 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
BEST1O76090 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST1O76090 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST1O76090 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.83■□□□□ 0.6
BEST1O76090 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.83■□□□□ 0.6
BEST1O76090 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.83■□□□□ 0.6
BEST1O76090 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.83■□□□□ 0.6
BEST1O76090 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BEST1O76090 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST1O76090 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST1O76090 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
BEST1O76090 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BEST1O76090 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.82■□□□□ 0.6
BEST1O76090 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.82■□□□□ 0.6
BEST1O76090 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
BEST1O76090 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
BEST1O76090 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.82■□□□□ 0.6
BEST1O76090 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.82■□□□□ 0.6
BEST1O76090 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
BEST1O76090 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.82■□□□□ 0.6
BEST1O76090 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
BEST1O76090 POM121L3P-201ENST00000419331 1163 ntBASIC18.82■□□□□ 0.6
BEST1O76090 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.82■□□□□ 0.6
BEST1O76090 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.82■□□□□ 0.6
BEST1O76090 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.82■□□□□ 0.6
BEST1O76090 AC009533.2-201ENST00000543664 586 ntBASIC18.82■□□□□ 0.6
BEST1O76090 MIR5100-201ENST00000579544 119 ntBASIC18.82■□□□□ 0.6
BEST1O76090 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.82■□□□□ 0.6
BEST1O76090 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms