Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.13□□□□□ -0.47
SNCGO76070 MPST-208ENST00000628507 698 ntTSL 5 BASIC12.13□□□□□ -0.47
SNCGO76070 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.13□□□□□ -0.47
SNCGO76070 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC12.13□□□□□ -0.47
SNCGO76070 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SNCGO76070 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SNCGO76070 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC12.13□□□□□ -0.47
SNCGO76070 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.13□□□□□ -0.47
SNCGO76070 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
SNCGO76070 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.13□□□□□ -0.47
SNCGO76070 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SNCGO76070 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.13□□□□□ -0.47
SNCGO76070 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.12□□□□□ -0.47
SNCGO76070 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.12□□□□□ -0.47
SNCGO76070 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC12.12□□□□□ -0.47
SNCGO76070 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.12□□□□□ -0.47
SNCGO76070 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SNCGO76070 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC12.12□□□□□ -0.47
SNCGO76070 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.12□□□□□ -0.47
SNCGO76070 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12.12□□□□□ -0.47
SNCGO76070 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SNCGO76070 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
SNCGO76070 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC12.12□□□□□ -0.47
SNCGO76070 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC12.12□□□□□ -0.47
SNCGO76070 AC073957.3-201ENST00000609998 6758 ntBASIC12.12□□□□□ -0.47
SNCGO76070 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SNCGO76070 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.12□□□□□ -0.47
SNCGO76070 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.12□□□□□ -0.47
SNCGO76070 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SNCGO76070 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNCGO76070 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC12.11□□□□□ -0.47
SNCGO76070 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SNCGO76070 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SNCGO76070 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SNCGO76070 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
SNCGO76070 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.11□□□□□ -0.47
SNCGO76070 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SNCGO76070 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC12.11□□□□□ -0.47
SNCGO76070 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.11□□□□□ -0.47
SNCGO76070 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SNCGO76070 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC12.11□□□□□ -0.47
SNCGO76070 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.11□□□□□ -0.47
SNCGO76070 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 NAA20-201ENST00000310450 920 ntTSL 2 BASIC12.11□□□□□ -0.47
SNCGO76070 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNCGO76070 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms