Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH16O75309 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CDH16O75309 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CDH16O75309 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH16O75309 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH16O75309 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CDH16O75309 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH16O75309 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH16O75309 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDH16O75309 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH16O75309 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDH16O75309 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH16O75309 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
CDH16O75309 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH16O75309 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH16O75309 KRT18P23-201ENST00000435622 1283 ntBASIC18.17■□□□□ 0.5
CDH16O75309 MFAP1P1-201ENST00000442257 1255 ntBASIC18.17■□□□□ 0.5
CDH16O75309 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH16O75309 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDH16O75309 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH16O75309 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH16O75309 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH16O75309 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.17■□□□□ 0.5
CDH16O75309 DGCR10-201ENST00000609839 495 ntBASIC18.17■□□□□ 0.5
CDH16O75309 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDH16O75309 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH16O75309 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH16O75309 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH16O75309 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CDH16O75309 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH16O75309 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH16O75309 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH16O75309 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH16O75309 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH16O75309 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDH16O75309 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH16O75309 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH16O75309 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH16O75309 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDH16O75309 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH16O75309 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH16O75309 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH16O75309 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH16O75309 RARRES2P10-201ENST00000564312 460 ntBASIC18.16■□□□□ 0.5
CDH16O75309 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDH16O75309 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH16O75309 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH16O75309 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH16O75309 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDH16O75309 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH16O75309 HLA-J-201ENST00000462773 1622 ntBASIC18.16■□□□□ 0.5
CDH16O75309 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH16O75309 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CDH16O75309 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH16O75309 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH16O75309 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH16O75309 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH16O75309 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH16O75309 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDH16O75309 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH16O75309 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CDH16O75309 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH16O75309 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH16O75309 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CDH16O75309 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH16O75309 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH16O75309 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH16O75309 AC142381.4-202ENST00000563973 229 ntBASIC18.15■□□□□ 0.5
CDH16O75309 MIR4674-201ENST00000582457 87 ntBASIC18.15■□□□□ 0.5
CDH16O75309 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH16O75309 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.15■□□□□ 0.5
CDH16O75309 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH16O75309 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH16O75309 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH16O75309 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH16O75309 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDH16O75309 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CDH16O75309 AC132938.6-201ENST00000623828 1655 ntBASIC18.15■□□□□ 0.5
CDH16O75309 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms