Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CNOT3O75175 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CNOT3O75175 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT3O75175 AC034236.2-201ENST00000606662 1610 ntBASIC17.46■□□□□ 0.39
CNOT3O75175 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT3O75175 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CNOT3O75175 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CNOT3O75175 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.45■□□□□ 0.38
CNOT3O75175 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.45■□□□□ 0.38
CNOT3O75175 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.45■□□□□ 0.38
CNOT3O75175 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 HCG4P8-203ENST00000443049 980 ntBASIC17.45■□□□□ 0.38
CNOT3O75175 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.45■□□□□ 0.38
CNOT3O75175 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.45■□□□□ 0.38
CNOT3O75175 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNOT3O75175 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 MTMR9LP-203ENST00000426597 1545 ntBASIC17.45■□□□□ 0.38
CNOT3O75175 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.45■□□□□ 0.38
CNOT3O75175 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.45■□□□□ 0.38
CNOT3O75175 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.45■□□□□ 0.38
CNOT3O75175 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 HEIH-201ENST00000623091 1652 ntBASIC17.45■□□□□ 0.38
CNOT3O75175 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT3O75175 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNOT3O75175 AL162741.1-201ENST00000565563 1558 ntBASIC17.45■□□□□ 0.38
CNOT3O75175 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.44■□□□□ 0.38
CNOT3O75175 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.44■□□□□ 0.38
CNOT3O75175 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CNOT3O75175 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CNOT3O75175 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.44■□□□□ 0.38
CNOT3O75175 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.44■□□□□ 0.38
CNOT3O75175 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.44■□□□□ 0.38
CNOT3O75175 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.44■□□□□ 0.38
CNOT3O75175 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.44■□□□□ 0.38
CNOT3O75175 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.44■□□□□ 0.38
CNOT3O75175 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CNOT3O75175 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 AL357033.4-201ENST00000617703 1807 ntBASIC17.44■□□□□ 0.38
CNOT3O75175 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.44■□□□□ 0.38
CNOT3O75175 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CNOT3O75175 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT3O75175 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CNOT3O75175 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CNOT3O75175 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CNOT3O75175 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CNOT3O75175 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CNOT3O75175 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.43■□□□□ 0.38
CNOT3O75175 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.43■□□□□ 0.38
CNOT3O75175 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 MIR662-201ENST00000384847 95 ntBASIC17.43■□□□□ 0.38
CNOT3O75175 ATP5G2P1-201ENST00000433580 426 ntBASIC17.43■□□□□ 0.38
CNOT3O75175 DUSP5P1-201ENST00000441325 1139 ntBASIC17.43■□□□□ 0.38
CNOT3O75175 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.43■□□□□ 0.38
CNOT3O75175 AC011498.5-201ENST00000592027 486 ntBASIC17.43■□□□□ 0.38
CNOT3O75175 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.43■□□□□ 0.38
CNOT3O75175 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.43■□□□□ 0.38
CNOT3O75175 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CNOT3O75175 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.43■□□□□ 0.38
CNOT3O75175 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms