Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE3O75131 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE3O75131 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CPNE3O75131 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CPNE3O75131 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE3O75131 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CPNE3O75131 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CPNE3O75131 IGHV3-47-201ENST00000425060 335 ntBASIC17.26■□□□□ 0.35
CPNE3O75131 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE3O75131 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.26■□□□□ 0.35
CPNE3O75131 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.26■□□□□ 0.35
CPNE3O75131 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE3O75131 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE3O75131 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE3O75131 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE3O75131 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CPNE3O75131 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CPNE3O75131 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CPNE3O75131 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.25■□□□□ 0.35
CPNE3O75131 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CPNE3O75131 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.25■□□□□ 0.35
CPNE3O75131 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.25■□□□□ 0.35
CPNE3O75131 MINOS1P3-201ENST00000457048 203 ntBASIC17.25■□□□□ 0.35
CPNE3O75131 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.25■□□□□ 0.35
CPNE3O75131 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.25■□□□□ 0.35
CPNE3O75131 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.25■□□□□ 0.35
CPNE3O75131 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 NSUN5P1-202ENST00000421140 1535 ntBASIC17.25■□□□□ 0.35
CPNE3O75131 NSUN5P2-203ENST00000457352 1529 ntBASIC17.25■□□□□ 0.35
CPNE3O75131 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE3O75131 SDHAP2-201ENST00000455183 2001 ntBASIC17.25■□□□□ 0.35
CPNE3O75131 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.24■□□□□ 0.35
CPNE3O75131 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CPNE3O75131 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
CPNE3O75131 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.24■□□□□ 0.35
CPNE3O75131 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.24■□□□□ 0.35
CPNE3O75131 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.24■□□□□ 0.35
CPNE3O75131 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.24■□□□□ 0.35
CPNE3O75131 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.24■□□□□ 0.35
CPNE3O75131 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.24■□□□□ 0.35
CPNE3O75131 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.24■□□□□ 0.35
CPNE3O75131 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.24■□□□□ 0.35
CPNE3O75131 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms