Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.34■□□□□ 0.37
GFRA3O60609 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.34■□□□□ 0.37
GFRA3O60609 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.34■□□□□ 0.37
GFRA3O60609 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
GFRA3O60609 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.34■□□□□ 0.37
GFRA3O60609 AL592309.1-201ENST00000443127 649 ntBASIC17.34■□□□□ 0.37
GFRA3O60609 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.34■□□□□ 0.37
GFRA3O60609 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
GFRA3O60609 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.34■□□□□ 0.37
GFRA3O60609 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.34■□□□□ 0.37
GFRA3O60609 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.34■□□□□ 0.37
GFRA3O60609 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
GFRA3O60609 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.34■□□□□ 0.37
GFRA3O60609 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA3O60609 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.34■□□□□ 0.37
GFRA3O60609 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.34■□□□□ 0.37
GFRA3O60609 NIFKP4-201ENST00000567275 1192 ntBASIC17.34■□□□□ 0.37
GFRA3O60609 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA3O60609 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
GFRA3O60609 AC092919.2-201ENST00000623631 1645 ntBASIC17.34■□□□□ 0.37
GFRA3O60609 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA3O60609 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA3O60609 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GFRA3O60609 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GFRA3O60609 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GFRA3O60609 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.33■□□□□ 0.37
GFRA3O60609 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GFRA3O60609 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GFRA3O60609 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GFRA3O60609 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GFRA3O60609 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GFRA3O60609 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.33■□□□□ 0.36
GFRA3O60609 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GFRA3O60609 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GFRA3O60609 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GFRA3O60609 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.33■□□□□ 0.36
GFRA3O60609 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.33■□□□□ 0.36
GFRA3O60609 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.33■□□□□ 0.36
GFRA3O60609 FAM86C2P-203ENST00000528684 1004 ntBASIC17.33■□□□□ 0.36
GFRA3O60609 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.33■□□□□ 0.36
GFRA3O60609 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.33■□□□□ 0.36
GFRA3O60609 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.33■□□□□ 0.36
GFRA3O60609 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GFRA3O60609 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.33■□□□□ 0.36
GFRA3O60609 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GFRA3O60609 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.33■□□□□ 0.36
GFRA3O60609 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GFRA3O60609 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GFRA3O60609 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GFRA3O60609 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GFRA3O60609 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.32■□□□□ 0.36
GFRA3O60609 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
GFRA3O60609 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GFRA3O60609 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GFRA3O60609 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.32■□□□□ 0.36
GFRA3O60609 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.32■□□□□ 0.36
GFRA3O60609 KRT8P48-201ENST00000515599 1220 ntBASIC17.32■□□□□ 0.36
GFRA3O60609 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.32■□□□□ 0.36
GFRA3O60609 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.32■□□□□ 0.36
GFRA3O60609 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.32■□□□□ 0.36
GFRA3O60609 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.32■□□□□ 0.36
GFRA3O60609 MIR6805-201ENST00000615055 62 ntBASIC17.32■□□□□ 0.36
GFRA3O60609 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.32■□□□□ 0.36
GFRA3O60609 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.32■□□□□ 0.36
GFRA3O60609 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.32■□□□□ 0.36
GFRA3O60609 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GFRA3O60609 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GFRA3O60609 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.31■□□□□ 0.36
GFRA3O60609 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GFRA3O60609 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
GFRA3O60609 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.31■□□□□ 0.36
GFRA3O60609 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
GFRA3O60609 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 AC122714.2-201ENST00000502787 707 ntBASIC17.31■□□□□ 0.36
GFRA3O60609 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.31■□□□□ 0.36
GFRA3O60609 KRT18P41-201ENST00000518924 1277 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms