Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX3O60493 AC091390.4-202ENST00000476426 537 ntBASIC17.71■□□□□ 0.43
SNX3O60493 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.71■□□□□ 0.43
SNX3O60493 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX3O60493 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX3O60493 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX3O60493 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX3O60493 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SNX3O60493 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX3O60493 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
SNX3O60493 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX3O60493 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX3O60493 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNX3O60493 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
SNX3O60493 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNX3O60493 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX3O60493 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX3O60493 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX3O60493 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX3O60493 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SNX3O60493 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SNX3O60493 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SNX3O60493 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.7■□□□□ 0.42
SNX3O60493 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.7■□□□□ 0.42
SNX3O60493 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 AC087623.3-201ENST00000607047 1098 ntBASIC17.7■□□□□ 0.42
SNX3O60493 AC008622.2-201ENST00000617006 1229 ntBASIC17.7■□□□□ 0.42
SNX3O60493 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNX3O60493 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.7■□□□□ 0.42
SNX3O60493 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.7■□□□□ 0.42
SNX3O60493 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX3O60493 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX3O60493 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.7■□□□□ 0.42
SNX3O60493 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX3O60493 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX3O60493 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.69■□□□□ 0.42
SNX3O60493 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX3O60493 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX3O60493 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SNX3O60493 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SNX3O60493 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX3O60493 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX3O60493 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SNX3O60493 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX3O60493 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX3O60493 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX3O60493 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX3O60493 CKBP1-201ENST00000565489 1086 ntBASIC17.69■□□□□ 0.42
SNX3O60493 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX3O60493 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SNX3O60493 AL445675.2-201ENST00000620291 557 ntBASIC17.69■□□□□ 0.42
SNX3O60493 MYC-209ENST00000641252 345 ntBASIC17.69■□□□□ 0.42
SNX3O60493 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SNX3O60493 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX3O60493 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SNX3O60493 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX3O60493 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX3O60493 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX3O60493 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX3O60493 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
SNX3O60493 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX3O60493 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.69■□□□□ 0.42
SNX3O60493 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX3O60493 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX3O60493 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SNX3O60493 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX3O60493 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX3O60493 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.68■□□□□ 0.42
SNX3O60493 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX3O60493 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 MIR6821-201ENST00000617625 74 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms