Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ACTN4O43707 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.16■□□□□ 0.82
ACTN4O43707 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.16■□□□□ 0.82
ACTN4O43707 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACTN4O43707 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.16■□□□□ 0.82
ACTN4O43707 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.16■□□□□ 0.82
ACTN4O43707 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACTN4O43707 AC141586.5-201ENST00000624546 2050 ntBASIC20.16■□□□□ 0.82
ACTN4O43707 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ACTN4O43707 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACTN4O43707 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ACTN4O43707 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACTN4O43707 COX11P1-201ENST00000489116 835 ntBASIC20.16■□□□□ 0.82
ACTN4O43707 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACTN4O43707 AL136038.4-201ENST00000603606 1261 ntBASIC20.16■□□□□ 0.82
ACTN4O43707 AC011558.1-201ENST00000623459 338 ntBASIC20.16■□□□□ 0.82
ACTN4O43707 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACTN4O43707 AC108860.2-201ENST00000562760 2183 ntBASIC20.16■□□□□ 0.82
ACTN4O43707 AC022898.2-201ENST00000616822 1312 ntBASIC20.16■□□□□ 0.82
ACTN4O43707 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ACTN4O43707 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ACTN4O43707 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.16■□□□□ 0.82
ACTN4O43707 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACTN4O43707 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ACTN4O43707 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACTN4O43707 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
ACTN4O43707 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.16■□□□□ 0.82
ACTN4O43707 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ACTN4O43707 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ACTN4O43707 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ACTN4O43707 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ACTN4O43707 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 TERF1P1-201ENST00000311003 1181 ntBASIC20.15■□□□□ 0.82
ACTN4O43707 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
ACTN4O43707 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.15■□□□□ 0.82
ACTN4O43707 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ACTN4O43707 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 AC113347.1-201ENST00000413321 391 ntBASIC20.15■□□□□ 0.82
ACTN4O43707 HLA-F-220ENST00000434407 884 ntBASIC20.15■□□□□ 0.82
ACTN4O43707 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.15■□□□□ 0.82
ACTN4O43707 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ACTN4O43707 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.15■□□□□ 0.82
ACTN4O43707 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.15■□□□□ 0.82
ACTN4O43707 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ACTN4O43707 AC133561.5-201ENST00000635547 218 ntBASIC20.15■□□□□ 0.82
ACTN4O43707 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 KRT8P47-201ENST00000604727 1398 ntBASIC20.15■□□□□ 0.82
ACTN4O43707 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.15■□□□□ 0.82
ACTN4O43707 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ACTN4O43707 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.15■□□□□ 0.82
ACTN4O43707 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.15■□□□□ 0.82
ACTN4O43707 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.15■□□□□ 0.82
ACTN4O43707 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ACTN4O43707 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACTN4O43707 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
ACTN4O43707 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ACTN4O43707 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
ACTN4O43707 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.14■□□□□ 0.82
ACTN4O43707 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ACTN4O43707 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ACTN4O43707 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.14■□□□□ 0.81
ACTN4O43707 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.14■□□□□ 0.81
ACTN4O43707 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
ACTN4O43707 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.14■□□□□ 0.81
ACTN4O43707 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.14■□□□□ 0.81
ACTN4O43707 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.14■□□□□ 0.81
ACTN4O43707 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ACTN4O43707 AC140113.3-201ENST00000605663 199 ntBASIC20.14■□□□□ 0.81
ACTN4O43707 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
ACTN4O43707 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.14■□□□□ 0.81
ACTN4O43707 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ACTN4O43707 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACTN4O43707 AC009949.1-201ENST00000623048 1830 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms