Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL845331.1-201ENST00000424978 1190 ntBASIC16.55■□□□□ 0.24
TO15178 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.55■□□□□ 0.24
TO15178 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TO15178 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TO15178 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TO15178 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.55■□□□□ 0.24
TO15178 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TO15178 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TO15178 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TO15178 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TO15178 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TO15178 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TO15178 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TO15178 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.55■□□□□ 0.24
TO15178 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TO15178 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TO15178 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.54■□□□□ 0.24
TO15178 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TO15178 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 KRT18P1-202ENST00000452408 1331 ntBASIC16.54■□□□□ 0.24
TO15178 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.54■□□□□ 0.24
TO15178 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.54■□□□□ 0.24
TO15178 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 UPK3BP1-201ENST00000428678 509 ntBASIC16.54■□□□□ 0.24
TO15178 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.54■□□□□ 0.24
TO15178 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TO15178 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TO15178 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.54■□□□□ 0.24
TO15178 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.54■□□□□ 0.24
TO15178 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.54■□□□□ 0.24
TO15178 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TO15178 MIR3180-1-201ENST00000580374 94 ntBASIC16.54■□□□□ 0.24
TO15178 MIR3180-3-201ENST00000584616 94 ntBASIC16.54■□□□□ 0.24
TO15178 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.54■□□□□ 0.24
TO15178 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.54■□□□□ 0.24
TO15178 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.54■□□□□ 0.24
TO15178 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TO15178 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.54■□□□□ 0.24
TO15178 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TO15178 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.54■□□□□ 0.24
TO15178 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.54■□□□□ 0.24
TO15178 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TO15178 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TO15178 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TO15178 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.53■□□□□ 0.24
TO15178 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.53■□□□□ 0.24
TO15178 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.53■□□□□ 0.24
TO15178 TPSP2-201ENST00000561760 610 ntBASIC16.53■□□□□ 0.24
TO15178 AC011840.4-201ENST00000578471 627 ntBASIC16.53■□□□□ 0.24
TO15178 AP002414.4-201ENST00000589764 1148 ntBASIC16.53■□□□□ 0.24
TO15178 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TO15178 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.53■□□□□ 0.24
TO15178 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.53■□□□□ 0.24
TO15178 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TO15178 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TO15178 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms