Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.57■■□□□ 1.04
SEMA3EO15041 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SEMA3EO15041 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SEMA3EO15041 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SEMA3EO15041 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SEMA3EO15041 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.57■■□□□ 1.04
SEMA3EO15041 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.57■■□□□ 1.04
SEMA3EO15041 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.57■■□□□ 1.04
SEMA3EO15041 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SEMA3EO15041 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SEMA3EO15041 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SEMA3EO15041 AC079416.2-201ENST00000625035 1193 ntBASIC21.57■■□□□ 1.04
SEMA3EO15041 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.57■■□□□ 1.04
SEMA3EO15041 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SEMA3EO15041 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SEMA3EO15041 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
SEMA3EO15041 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SEMA3EO15041 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SEMA3EO15041 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.57■■□□□ 1.04
SEMA3EO15041 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SEMA3EO15041 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.56■■□□□ 1.04
SEMA3EO15041 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SEMA3EO15041 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SEMA3EO15041 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 RPS2P28-201ENST00000314255 741 ntBASIC21.56■■□□□ 1.04
SEMA3EO15041 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 AL590627.1-203ENST00000421194 1026 ntBASIC21.56■■□□□ 1.04
SEMA3EO15041 HNRNPDP1-201ENST00000439535 754 ntBASIC21.56■■□□□ 1.04
SEMA3EO15041 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.56■■□□□ 1.04
SEMA3EO15041 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SEMA3EO15041 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.56■■□□□ 1.04
SEMA3EO15041 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 AC116407.2-201ENST00000613639 860 ntBASIC21.56■■□□□ 1.04
SEMA3EO15041 AC073592.4-201ENST00000623827 446 ntBASIC21.56■■□□□ 1.04
SEMA3EO15041 FAM215A-202ENST00000632077 792 ntBASIC21.56■■□□□ 1.04
SEMA3EO15041 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SEMA3EO15041 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
SEMA3EO15041 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEMA3EO15041 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.55■■□□□ 1.04
SEMA3EO15041 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SEMA3EO15041 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SEMA3EO15041 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SEMA3EO15041 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.55■■□□□ 1.04
SEMA3EO15041 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
SEMA3EO15041 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SEMA3EO15041 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.55■■□□□ 1.04
SEMA3EO15041 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
SEMA3EO15041 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.55■■□□□ 1.04
SEMA3EO15041 AC120114.3-201ENST00000611923 658 ntBASIC21.55■■□□□ 1.04
SEMA3EO15041 MIR7706-201ENST00000613747 67 ntBASIC21.55■■□□□ 1.04
SEMA3EO15041 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.55■■□□□ 1.04
SEMA3EO15041 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.55■■□□□ 1.04
SEMA3EO15041 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SEMA3EO15041 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.55■■□□□ 1.04
SEMA3EO15041 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEMA3EO15041 AC079776.2-201ENST00000641154 1609 ntBASIC21.55■■□□□ 1.04
SEMA3EO15041 IL9RP2-201ENST00000423948 1312 ntBASIC21.55■■□□□ 1.04
SEMA3EO15041 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.54■■□□□ 1.04
SEMA3EO15041 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.54■■□□□ 1.04
SEMA3EO15041 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.54■■□□□ 1.04
SEMA3EO15041 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.54■■□□□ 1.04
SEMA3EO15041 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SEMA3EO15041 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.54■■□□□ 1.04
SEMA3EO15041 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.54■■□□□ 1.04
SEMA3EO15041 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.54■■□□□ 1.04
SEMA3EO15041 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.54■■□□□ 1.04
SEMA3EO15041 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 NKAPP1-205ENST00000585790 367 ntBASIC21.54■■□□□ 1.04
SEMA3EO15041 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms