Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
AP3B1O00203 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
AP3B1O00203 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.19■□□□□ 0.5
AP3B1O00203 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
AP3B1O00203 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3B1O00203 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.19■□□□□ 0.5
AP3B1O00203 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
AP3B1O00203 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP3B1O00203 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3B1O00203 LINC00602-201ENST00000629776 2065 ntBASIC18.18■□□□□ 0.5
AP3B1O00203 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3B1O00203 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3B1O00203 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.18■□□□□ 0.5
AP3B1O00203 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
AP3B1O00203 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3B1O00203 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3B1O00203 STARP1-201ENST00000397973 869 ntBASIC18.18■□□□□ 0.5
AP3B1O00203 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.18■□□□□ 0.5
AP3B1O00203 AL136038.4-201ENST00000603606 1261 ntBASIC18.18■□□□□ 0.5
AP3B1O00203 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3B1O00203 AC073912.3-201ENST00000624414 853 ntBASIC18.18■□□□□ 0.5
AP3B1O00203 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
AP3B1O00203 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3B1O00203 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP3B1O00203 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP3B1O00203 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
AP3B1O00203 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.18■□□□□ 0.5
AP3B1O00203 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3B1O00203 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.17■□□□□ 0.5
AP3B1O00203 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
AP3B1O00203 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3B1O00203 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
AP3B1O00203 AC113347.1-201ENST00000413321 391 ntBASIC18.17■□□□□ 0.5
AP3B1O00203 AL137013.1-201ENST00000432946 1228 ntBASIC18.17■□□□□ 0.5
AP3B1O00203 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
AP3B1O00203 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3B1O00203 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3B1O00203 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 AL023973.1-201ENST00000624619 620 ntBASIC18.17■□□□□ 0.5
AP3B1O00203 AC097493.4-201ENST00000641197 219 ntBASIC18.17■□□□□ 0.5
AP3B1O00203 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
AP3B1O00203 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3B1O00203 AC012317.2-201ENST00000623305 2251 ntBASIC18.17■□□□□ 0.5
AP3B1O00203 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
AP3B1O00203 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.17■□□□□ 0.5
AP3B1O00203 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 AL391807.1-203ENST00000604392 2365 ntBASIC18.17■□□□□ 0.5
AP3B1O00203 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3B1O00203 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
AP3B1O00203 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
AP3B1O00203 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
AP3B1O00203 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
AP3B1O00203 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3B1O00203 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
AP3B1O00203 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
AP3B1O00203 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
AP3B1O00203 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.16■□□□□ 0.5
AP3B1O00203 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3B1O00203 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3B1O00203 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.16■□□□□ 0.5
AP3B1O00203 KRT18P48-201ENST00000434763 852 ntBASIC18.16■□□□□ 0.5
AP3B1O00203 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.16■□□□□ 0.5
AP3B1O00203 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 AC020916.1-201ENST00000587762 1774 ntBASIC18.16■□□□□ 0.5
AP3B1O00203 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.16■□□□□ 0.5
AP3B1O00203 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP3B1O00203 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3B1O00203 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
AP3B1O00203 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
AP3B1O00203 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms