Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 SLC25A6P4-201ENST00000586535 553 ntBASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 AL096828.2-201ENST00000567259 1965 ntBASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 SCARNA2-201ENST00000458748 420 ntBASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 AL355877.3-201ENST00000622820 899 ntBASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C1QTNF3-AMACRE9PGA6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.96■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AL138781.2-201ENST00000617896 1843 ntBASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC096633.1-201ENST00000422446 749 ntBASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC007967.3-201ENST00000434308 558 ntBASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 FAM197Y8-203ENST00000450145 560 ntBASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AF186996.4-201ENST00000467186 377 ntBASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MTDHP3-201ENST00000594186 672 ntBASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TP73-AS1-207ENST00000624167 988 ntBASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC090340.1-201ENST00000620778 4980 ntBASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC093677.2-201ENST00000600169 1863 ntBASIC17.95■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ABCD1P5-201ENST00000445663 754 ntBASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AP001269.4-201ENST00000609611 512 ntBASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms