Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 PHGDH-209ENST00000641074 1780 ntBASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 AC073592.3-201ENST00000625118 1834 ntBASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TBC1D3FA6NER0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 IL9RP2-201ENST00000423948 1312 ntBASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 RNA5SP419-201ENST00000515908 135 ntBASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.85■□□□□ 0.45
TBC1D3FA6NER0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms