Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.73■□□□□ 0.91
PALM3A6NDB9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
PALM3A6NDB9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PALM3A6NDB9 AC011467.2-201ENST00000598425 242 ntBASIC20.73■□□□□ 0.91
PALM3A6NDB9 AL121772.3-201ENST00000610840 674 ntBASIC20.73■□□□□ 0.91
PALM3A6NDB9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.73■□□□□ 0.91
PALM3A6NDB9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.73■□□□□ 0.91
PALM3A6NDB9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.73■□□□□ 0.91
PALM3A6NDB9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PALM3A6NDB9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PALM3A6NDB9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PALM3A6NDB9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PALM3A6NDB9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.73■□□□□ 0.91
PALM3A6NDB9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PALM3A6NDB9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PALM3A6NDB9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PALM3A6NDB9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.73■□□□□ 0.91
PALM3A6NDB9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PALM3A6NDB9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PALM3A6NDB9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PALM3A6NDB9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PALM3A6NDB9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 KRT16P4-201ENST00000453883 522 ntBASIC20.72■□□□□ 0.91
PALM3A6NDB9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 MIR5100-201ENST00000579544 119 ntBASIC20.72■□□□□ 0.91
PALM3A6NDB9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.72■□□□□ 0.91
PALM3A6NDB9 AC114341.1-201ENST00000618070 349 ntBASIC20.72■□□□□ 0.91
PALM3A6NDB9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PALM3A6NDB9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PALM3A6NDB9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.72■□□□□ 0.91
PALM3A6NDB9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PALM3A6NDB9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PALM3A6NDB9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PALM3A6NDB9 AC010460.3-201ENST00000511359 1579 ntBASIC20.72■□□□□ 0.91
PALM3A6NDB9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PALM3A6NDB9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PALM3A6NDB9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 AC007967.3-201ENST00000434308 558 ntBASIC20.71■□□□□ 0.91
PALM3A6NDB9 AC096582.2-201ENST00000510860 516 ntBASIC20.71■□□□□ 0.91
PALM3A6NDB9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 AC091304.2-201ENST00000564639 760 ntBASIC20.71■□□□□ 0.91
PALM3A6NDB9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 AL390961.4-201ENST00000623958 2535 ntBASIC20.71■□□□□ 0.91
PALM3A6NDB9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PALM3A6NDB9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.71■□□□□ 0.91
PALM3A6NDB9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.7■□□□□ 0.91
PALM3A6NDB9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.7■□□□□ 0.91
PALM3A6NDB9 INTS4P1-201ENST00000438455 1935 ntBASIC20.7■□□□□ 0.91
PALM3A6NDB9 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.7■□□□□ 0.91
PALM3A6NDB9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.7■□□□□ 0.9
PALM3A6NDB9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
PALM3A6NDB9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.7■□□□□ 0.9
PALM3A6NDB9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PALM3A6NDB9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.7■□□□□ 0.9
PALM3A6NDB9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PALM3A6NDB9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PALM3A6NDB9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PALM3A6NDB9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PALM3A6NDB9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms