Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 BX276092.5-203ENST00000456199 560 ntBASIC17.09■□□□□ 0.33
LRIT2A6NDA9 RN7SL606P-201ENST00000472779 293 ntBASIC17.09■□□□□ 0.33
LRIT2A6NDA9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 AP000550.4-202ENST00000639755 178 ntBASIC17.09■□□□□ 0.33
LRIT2A6NDA9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRIT2A6NDA9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.08■□□□□ 0.33
LRIT2A6NDA9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRIT2A6NDA9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRIT2A6NDA9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRIT2A6NDA9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRIT2A6NDA9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRIT2A6NDA9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
LRIT2A6NDA9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
LRIT2A6NDA9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRIT2A6NDA9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 AC016734.2-201ENST00000624325 1377 ntBASIC17.08■□□□□ 0.32
LRIT2A6NDA9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 AL121672.3-201ENST00000608644 468 ntBASIC17.08■□□□□ 0.32
LRIT2A6NDA9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LRIT2A6NDA9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 KRT8P47-201ENST00000604727 1398 ntBASIC17.07■□□□□ 0.32
LRIT2A6NDA9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.07■□□□□ 0.32
LRIT2A6NDA9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms