Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 ZNF444P1-201ENST00000559497 298 ntBASIC18■□□□□ 0.47
CCDC162PA2VCL2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC162PA2VCL2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 AC012317.2-201ENST00000623305 2251 ntBASIC18■□□□□ 0.47
CCDC162PA2VCL2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CCDC162PA2VCL2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 SPDYE13P-201ENST00000445314 798 ntBASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 AP003733.1-201ENST00000491725 852 ntBASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 AC083849.1-201ENST00000615227 514 ntBASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 BCL2-203ENST00000589955 5011 ntBASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC162PA2VCL2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC162PA2VCL2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 AC006116.8-202ENST00000587620 1550 ntBASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 IGHGP-201ENST00000390555 1178 ntBASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms