Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 AC005104.2-201ENST00000427818 678 ntBASIC26.48■■□□□ 1.83
HFM1A2PYH4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 PAN3-AS1-201ENST00000563843 1351 ntBASIC26.47■■□□□ 1.83
HFM1A2PYH4 AL049757.1-201ENST00000616842 1596 ntBASIC26.47■■□□□ 1.83
HFM1A2PYH4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC26.47■■□□□ 1.83
HFM1A2PYH4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC26.47■■□□□ 1.83
HFM1A2PYH4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
HFM1A2PYH4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HFM1A2PYH4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HFM1A2PYH4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC26.47■■□□□ 1.83
HFM1A2PYH4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HFM1A2PYH4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC26.47■■□□□ 1.83
HFM1A2PYH4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
HFM1A2PYH4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC26.47■■□□□ 1.83
HFM1A2PYH4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HFM1A2PYH4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC26.47■■□□□ 1.83
HFM1A2PYH4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC26.47■■□□□ 1.83
HFM1A2PYH4 KRT18P67-201ENST00000432816 1264 ntBASIC26.47■■□□□ 1.83
HFM1A2PYH4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
HFM1A2PYH4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
HFM1A2PYH4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC26.47■■□□□ 1.83
HFM1A2PYH4 SART3-203ENST00000546611 1184 ntBASIC26.47■■□□□ 1.83
HFM1A2PYH4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HFM1A2PYH4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
HFM1A2PYH4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
HFM1A2PYH4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC26.47■■□□□ 1.83
HFM1A2PYH4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC26.46■■□□□ 1.83
HFM1A2PYH4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HFM1A2PYH4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
HFM1A2PYH4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HFM1A2PYH4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HFM1A2PYH4 BX276092.7-203ENST00000637198 1536 ntBASIC26.46■■□□□ 1.83
HFM1A2PYH4 SIGLEC16-201ENST00000599858 1437 ntBASIC26.46■■□□□ 1.83
HFM1A2PYH4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HFM1A2PYH4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC26.46■■□□□ 1.83
HFM1A2PYH4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HFM1A2PYH4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC26.46■■□□□ 1.83
HFM1A2PYH4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
HFM1A2PYH4 AC079776.2-201ENST00000641154 1609 ntBASIC26.45■■□□□ 1.83
HFM1A2PYH4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
HFM1A2PYH4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC26.45■■□□□ 1.82
HFM1A2PYH4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
HFM1A2PYH4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HFM1A2PYH4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HFM1A2PYH4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
HFM1A2PYH4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC26.45■■□□□ 1.82
HFM1A2PYH4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC26.45■■□□□ 1.82
HFM1A2PYH4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HFM1A2PYH4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
HFM1A2PYH4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
HFM1A2PYH4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HFM1A2PYH4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC26.45■■□□□ 1.82
HFM1A2PYH4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC26.44■■□□□ 1.82
HFM1A2PYH4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC26.44■■□□□ 1.82
HFM1A2PYH4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
HFM1A2PYH4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
HFM1A2PYH4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC26.44■■□□□ 1.82
HFM1A2PYH4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC26.44■■□□□ 1.82
HFM1A2PYH4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
HFM1A2PYH4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
HFM1A2PYH4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
HFM1A2PYH4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
HFM1A2PYH4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC26.44■■□□□ 1.82
HFM1A2PYH4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC26.44■■□□□ 1.82
HFM1A2PYH4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC26.44■■□□□ 1.82
HFM1A2PYH4 AC116407.2-201ENST00000613639 860 ntBASIC26.44■■□□□ 1.82
HFM1A2PYH4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
HFM1A2PYH4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
HFM1A2PYH4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
HFM1A2PYH4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
HFM1A2PYH4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
HFM1A2PYH4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
HFM1A2PYH4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HFM1A2PYH4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HFM1A2PYH4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HFM1A2PYH4 HLA-A-201ENST00000376802 1334 ntBASIC26.43■■□□□ 1.82
HFM1A2PYH4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
HFM1A2PYH4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HFM1A2PYH4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC26.43■■□□□ 1.82
HFM1A2PYH4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC26.43■■□□□ 1.82
HFM1A2PYH4 SPDYE21P-201ENST00000413323 827 ntBASIC26.43■■□□□ 1.82
HFM1A2PYH4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC26.43■■□□□ 1.82
HFM1A2PYH4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC26.43■■□□□ 1.82
HFM1A2PYH4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
HFM1A2PYH4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC26.43■■□□□ 1.82
HFM1A2PYH4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC26.43■■□□□ 1.82
HFM1A2PYH4 MTDHP3-201ENST00000594186 672 ntBASIC26.43■■□□□ 1.82
HFM1A2PYH4 AC025062.2-201ENST00000605477 670 ntBASIC26.43■■□□□ 1.82
HFM1A2PYH4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
HFM1A2PYH4 AC148477.8-201ENST00000624298 468 ntBASIC26.43■■□□□ 1.82
HFM1A2PYH4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
HFM1A2PYH4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms