Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 AC093010.1-201ENST00000473625 1624 ntBASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 IGLL3P-201ENST00000412472 434 ntBASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.73■■□□□ 1.23
LOC102724428A0A0B4J2F2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC22.72■■□□□ 1.23
LOC102724428A0A0B4J2F2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 CEND1P1-201ENST00000451006 455 ntBASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
LOC102724428A0A0B4J2F2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
LOC102724428A0A0B4J2F2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 AL031432.2-201ENST00000566714 459 ntBASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 AL928711.1-201ENST00000570165 459 ntBASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 PHGDH-209ENST00000641074 1780 ntBASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 AC116562.4-201ENST00000641316 2276 ntBASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
LOC102724428A0A0B4J2F2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
LOC102724428A0A0B4J2F2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
LOC102724428A0A0B4J2F2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC22.69■■□□□ 1.22
LOC102724428A0A0B4J2F2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LOC102724428A0A0B4J2F2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC22.69■■□□□ 1.22
LOC102724428A0A0B4J2F2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LOC102724428A0A0B4J2F2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
LOC102724428A0A0B4J2F2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC22.69■■□□□ 1.22
LOC102724428A0A0B4J2F2 DUTP2-201ENST00000519164 463 ntBASIC22.69■■□□□ 1.22
LOC102724428A0A0B4J2F2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms