Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 FAM220CP-201ENST00000395253 831 ntBASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 AP001269.4-201ENST00000609611 512 ntBASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
TRGV5A0A0B4J1U4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRGV5A0A0B4J1U4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
TRGV5A0A0B4J1U4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 KRT18P67-201ENST00000432816 1264 ntBASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 ABCD1P5-201ENST00000445663 754 ntBASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 SCARNA2-201ENST00000458748 420 ntBASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 AL773604.1-201ENST00000617417 272 ntBASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRGV5A0A0B4J1U4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 AL096828.2-201ENST00000567259 1965 ntBASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 AC007967.3-201ENST00000434308 558 ntBASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 FGFR3P6-201ENST00000457012 610 ntBASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 AC073648.2-201ENST00000510116 352 ntBASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 AP001005.1-201ENST00000571755 1248 ntBASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 HLA-A-201ENST00000376802 1334 ntBASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 AP005117.1-201ENST00000584346 1413 ntBASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms