Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 AC126335.2-201ENST00000623362 4637 ntBASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 KRT8P17-201ENST00000453110 1448 ntBASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 AC245052.3-201ENST00000450182 901 ntBASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 AC022413.1-201ENST00000624602 984 ntBASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
SPCS1Q9Y6A9 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 AL096828.2-201ENST00000567259 1965 ntBASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 pRNA.6-201ENST00000610482 90 ntBASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 pRNA.5-201ENST00000612139 90 ntBASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 pRNA.11-201ENST00000618423 90 ntBASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 pRNA.13-201ENST00000619112 90 ntBASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SPCS1Q9Y6A9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms