Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 SPDYE21P-201ENST00000413323 827 ntBASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 MCCD1P2-201ENST00000423228 335 ntBASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 AL596442.2-201ENST00000610240 980 ntBASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC2Q9Y5Z7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.72■□□□□ 0.59
HCFC2Q9Y5Z7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 AC005829.1-201ENST00000570002 483 ntBASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 ANO7L1-203ENST00000602586 1720 ntBASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 KRT18P28-201ENST00000453838 1332 ntBASIC18.71■□□□□ 0.59
HCFC2Q9Y5Z7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms