Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 AC135776.1-201ENST00000319817 2481 ntBASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 MTCL1P1-201ENST00000446207 792 ntBASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 AC096582.2-201ENST00000510860 516 ntBASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 MIR5100-201ENST00000579544 119 ntBASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 AL121912.1-201ENST00000603683 238 ntBASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 AP002469.2-201ENST00000531724 424 ntBASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 REXO1L6P-202ENST00000619970 1078 ntBASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 AC093677.2-201ENST00000600169 1863 ntBASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHB2Q9Y5E7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 ESPNP-201ENST00000270691 2015 ntBASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 SAPCD2P3-201ENST00000455031 850 ntBASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 AL591684.3-201ENST00000605187 298 ntBASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 AC114341.1-201ENST00000618070 349 ntBASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHB2Q9Y5E7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB2Q9Y5E7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB2Q9Y5E7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB2Q9Y5E7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms