Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
R3HCC1Q9Y3T6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.64■□□□□ 0.89
R3HCC1Q9Y3T6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HCC1Q9Y3T6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 MFAP1P1-201ENST00000442257 1255 ntBASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 C2orf69P3-201ENST00000565542 1120 ntBASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
R3HCC1Q9Y3T6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 TSPY15P-201ENST00000457163 923 ntBASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 AC008040.2-201ENST00000461049 708 ntBASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 FITM1-202ENST00000559294 800 ntBASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.61■□□□□ 0.89
R3HCC1Q9Y3T6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 AP005242.2-201ENST00000580065 1175 ntBASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms