Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.75■■□□□ 1.07
LEMD3Q9Y2U8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LEMD3Q9Y2U8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LEMD3Q9Y2U8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LEMD3Q9Y2U8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LEMD3Q9Y2U8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LEMD3Q9Y2U8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LEMD3Q9Y2U8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 SPDYE21P-201ENST00000413323 827 ntBASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 KRT18P27-201ENST00000427733 1299 ntBASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LEMD3Q9Y2U8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 MIR1233-2-201ENST00000408138 82 ntBASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 MIR1233-1-201ENST00000408722 82 ntBASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.73■■□□□ 1.07
LEMD3Q9Y2U8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 KRT18P3-201ENST00000451602 1288 ntBASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 AC073592.5-201ENST00000624854 528 ntBASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.72■■□□□ 1.07
LEMD3Q9Y2U8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 AC006557.2-201ENST00000592985 1240 ntBASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 AC004817.3-201ENST00000602957 2129 ntBASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 AL353593.2-201ENST00000602529 1483 ntBASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LEMD3Q9Y2U8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms