Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 AC022188.1-201ENST00000620960 1664 ntBASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 AC007950.2-201ENST00000615045 2347 ntBASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.13■□□□□ 0.33
LRCH1Q9Y2L9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH1Q9Y2L9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 LSM12P1-201ENST00000411836 588 ntBASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 CD99P1-205ENST00000527459 561 ntBASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 KRT18P6-201ENST00000555540 1265 ntBASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms