Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 MOK-208ENST00000519058 917 ntTSL 2 BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 SART3-203ENST00000546611 1184 ntBASIC24.5■■□□□ 1.51
NINLQ9Y2I6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC24.5■■□□□ 1.51
NINLQ9Y2I6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 PMPCAP1-201ENST00000508114 1576 ntBASIC24.49■■□□□ 1.51
NINLQ9Y2I6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 AL356309.3-201ENST00000624132 1934 ntBASIC24.49■■□□□ 1.51
NINLQ9Y2I6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC24.49■■□□□ 1.51
NINLQ9Y2I6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 COX5BP2-201ENST00000392354 334 ntBASIC24.49■■□□□ 1.51
NINLQ9Y2I6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC24.49■■□□□ 1.51
NINLQ9Y2I6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 SIGLEC16-201ENST00000599858 1437 ntBASIC24.48■■□□□ 1.51
NINLQ9Y2I6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 KRT18P58-201ENST00000527480 1120 ntBASIC24.48■■□□□ 1.51
NINLQ9Y2I6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
NINLQ9Y2I6 AC079776.2-201ENST00000641154 1609 ntBASIC24.47■■□□□ 1.51
NINLQ9Y2I6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NINLQ9Y2I6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
NINLQ9Y2I6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NINLQ9Y2I6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
NINLQ9Y2I6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NINLQ9Y2I6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC24.47■■□□□ 1.51
NINLQ9Y2I6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC24.47■■□□□ 1.51
NINLQ9Y2I6 DDX43P3-201ENST00000441064 443 ntBASIC24.47■■□□□ 1.51
NINLQ9Y2I6 RNPS1P1-201ENST00000507437 918 ntBASIC24.47■■□□□ 1.51
NINLQ9Y2I6 AC021087.4-201ENST00000563761 564 ntBASIC24.47■■□□□ 1.51
NINLQ9Y2I6 AC025062.2-201ENST00000605477 670 ntBASIC24.47■■□□□ 1.51
NINLQ9Y2I6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC24.47■■□□□ 1.51
NINLQ9Y2I6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NINLQ9Y2I6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC24.47■■□□□ 1.51
NINLQ9Y2I6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NINLQ9Y2I6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC24.47■■□□□ 1.51
NINLQ9Y2I6 AC135776.1-201ENST00000319817 2481 ntBASIC24.46■■□□□ 1.51
NINLQ9Y2I6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 AC103564.2-201ENST00000432853 1299 ntBASIC24.46■■□□□ 1.51
NINLQ9Y2I6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC24.46■■□□□ 1.51
NINLQ9Y2I6 FAM215A-202ENST00000632077 792 ntBASIC24.46■■□□□ 1.51
NINLQ9Y2I6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms