Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 AP001005.1-201ENST00000571755 1248 ntBASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 AL773604.1-201ENST00000617417 272 ntBASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 MYLKP1-201ENST00000509077 1580 ntBASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX2IPQ9Y2D8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 FAM197Y8-203ENST00000450145 560 ntBASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 AF186996.4-201ENST00000467186 377 ntBASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 AC009533.2-201ENST00000543664 586 ntBASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SSX2IPQ9Y2D8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
SSX2IPQ9Y2D8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSX2IPQ9Y2D8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSX2IPQ9Y2D8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.33■□□□□ 0.69
SSX2IPQ9Y2D8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 AC093909.1-201ENST00000504731 1122 ntBASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 AC009154.2-201ENST00000621177 724 ntBASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 AC005082.1-201ENST00000413042 2259 ntBASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSX2IPQ9Y2D8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SSX2IPQ9Y2D8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SSX2IPQ9Y2D8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSX2IPQ9Y2D8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SSX2IPQ9Y2D8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSX2IPQ9Y2D8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSX2IPQ9Y2D8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.32■□□□□ 0.68
SSX2IPQ9Y2D8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSX2IPQ9Y2D8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms