Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.21□□□□□ -0.3
HHLA3Q9XRX5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 AL162727.3-201ENST00000635661 2787 ntBASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 AL596275.1-201ENST00000423464 877 ntBASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 AC128688.1-201ENST00000487626 519 ntBASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 BX088651.1-201ENST00000540551 451 ntBASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 AL353719.1-201ENST00000566847 864 ntBASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 AC008622.2-201ENST00000617006 1229 ntBASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 AL357033.4-201ENST00000617703 1807 ntBASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.2□□□□□ -0.3
HHLA3Q9XRX5 CICP6-201ENST00000457191 2729 ntBASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 AL023284.2-201ENST00000405850 579 ntBASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 NAPSB-206ENST00000562112 1266 ntBASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HHLA3Q9XRX5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HHLA3Q9XRX5 AC008556.1-201ENST00000610908 2040 ntBASIC13.18□□□□□ -0.3
HHLA3Q9XRX5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HHLA3Q9XRX5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HHLA3Q9XRX5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HHLA3Q9XRX5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms