Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 CYGB-205ENST00000590175 830 ntTSL 3 BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 AC126763.1-201ENST00000552015 2118 ntBASIC23.41■■□□□ 1.34
SPG7Q9UQ90 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SPG7Q9UQ90 AC093010.1-201ENST00000473625 1624 ntBASIC23.41■■□□□ 1.34
SPG7Q9UQ90 KRT8P47-201ENST00000604727 1398 ntBASIC23.4■■□□□ 1.34
SPG7Q9UQ90 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
SPG7Q9UQ90 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC23.4■■□□□ 1.34
SPG7Q9UQ90 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SPG7Q9UQ90 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SPG7Q9UQ90 HS6ST1P1-201ENST00000481504 1234 ntBASIC23.4■■□□□ 1.34
SPG7Q9UQ90 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23.4■■□□□ 1.34
SPG7Q9UQ90 AC040169.1-201ENST00000565382 521 ntBASIC23.4■■□□□ 1.34
SPG7Q9UQ90 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC23.4■■□□□ 1.34
SPG7Q9UQ90 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
SPG7Q9UQ90 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SPG7Q9UQ90 AC087289.5-201ENST00000586076 3175 ntBASIC23.4■■□□□ 1.34
SPG7Q9UQ90 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
SPG7Q9UQ90 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC23.4■■□□□ 1.34
SPG7Q9UQ90 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SPG7Q9UQ90 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SPG7Q9UQ90 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.39■■□□□ 1.34
SPG7Q9UQ90 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 AC103564.2-201ENST00000432853 1299 ntBASIC23.39■■□□□ 1.33
SPG7Q9UQ90 AC009947.1-201ENST00000444350 727 ntBASIC23.39■■□□□ 1.33
SPG7Q9UQ90 RNA5SP416-201ENST00000516838 111 ntBASIC23.39■■□□□ 1.33
SPG7Q9UQ90 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 AL691403.2-201ENST00000618460 490 ntBASIC23.39■■□□□ 1.33
SPG7Q9UQ90 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 AC055717.3-201ENST00000622967 595 ntBASIC23.39■■□□□ 1.33
SPG7Q9UQ90 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 SIGLEC16-201ENST00000599858 1437 ntBASIC23.39■■□□□ 1.33
SPG7Q9UQ90 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SPG7Q9UQ90 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 PHGDH-209ENST00000641074 1780 ntBASIC23.38■■□□□ 1.33
SPG7Q9UQ90 KRT18P27-201ENST00000427733 1299 ntBASIC23.38■■□□□ 1.33
SPG7Q9UQ90 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SPG7Q9UQ90 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 AC022898.2-201ENST00000616822 1312 ntBASIC23.37■■□□□ 1.33
SPG7Q9UQ90 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 RPSAP43-201ENST00000402237 625 ntBASIC23.37■■□□□ 1.33
SPG7Q9UQ90 SPDYE21P-201ENST00000413323 827 ntBASIC23.37■■□□□ 1.33
SPG7Q9UQ90 PON3-205ENST00000451904 1053 ntTSL 3 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 DUTP2-201ENST00000519164 463 ntBASIC23.37■■□□□ 1.33
SPG7Q9UQ90 SDCCAG3P1-201ENST00000589292 1150 ntBASIC23.37■■□□□ 1.33
SPG7Q9UQ90 AC010327.4-202ENST00000591484 748 ntBASIC23.37■■□□□ 1.33
SPG7Q9UQ90 AC006557.2-201ENST00000592985 1240 ntBASIC23.37■■□□□ 1.33
SPG7Q9UQ90 MIR1199-201ENST00000621445 119 ntBASIC23.37■■□□□ 1.33
SPG7Q9UQ90 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.37■■□□□ 1.33
SPG7Q9UQ90 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms